Spiroplasma chinense: SCHIN_v1c10170
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Entry
SCHIN_v1c10170 CDS
T06905
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
schi
Spiroplasma chinense
Pathway
schi03030
DNA replication
schi03430
Mismatch repair
schi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
schi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SCHIN_v1c10170 (dnaE)
03430 Mismatch repair
SCHIN_v1c10170 (dnaE)
03440 Homologous recombination
SCHIN_v1c10170 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schi03032
]
SCHIN_v1c10170 (dnaE)
03400 DNA repair and recombination proteins [BR:
schi03400
]
SCHIN_v1c10170 (dnaE)
Enzymes [BR:
schi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SCHIN_v1c10170 (dnaE)
DNA replication proteins [BR:
schi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SCHIN_v1c10170 (dnaE)
DNA repair and recombination proteins [BR:
schi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SCHIN_v1c10170 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QEH62210
UniProt:
A0A5B9Y5I4
LinkDB
All DBs
Position
complement(1159221..1162205)
Genome browser
AA seq
994 aa
AA seq
DB search
MKYSSLVNVQSCYNFLKSVIKPEDYVGFLQKNEIKVGFYSDLYSMYGAAEFAKLASSRGV
KPIIGAAFDVSFGRIILYAKNNKGFKRISYLSSSVLNEDKIDLQKLEQEIFTKAGDDVFV
IFISSVENLDNYKDKLKKVFNDNLFFGITKTNFHFFKNESNLIFANEVNYLYEDDYFQYK
VLRAIGEAKLLTETENIEKNFYVSNAQMQNYIDVQKHNENISKIIEQVEDDVINDNQVHF
IKFKDAKNDSSSTYIEKLCKNKLVELGLSENQQYSERLVYELEVIKKMGFEDYFLIVSDM
INAAEEKNILVGPGRGSASGSLVSYLLNITKLDPIKWDLLFERFLNVDRITLPDIDIDFE
DERREEVLEYLYKKYGREHFATITTFQTIGIKNAIRDCGRVFDLPNDDVTHMTRLIGDKN
VKDLDKALEESRNLTKYKEKYPQVFEVIKKIIGLPRQTGTHAAGVVFCDVPLWEVVPTKV
GINGILQTQFSMNFLEEIGLIKTDILGLRNLSIIQQVISSVEKLNQTKIDLKSLPLNDKD
TFELLRNRQTSGIFQLESQGMTEVLTSMKVNSIEDIAVTSALFRPGPQENIPTYIARKND
NNREFSIDKSLTDILGDTYGIIVYQEQVMKILQKVANFELSKADIVRRAIGKKDQKLMAE
FKKEFVQGALENKYNEGRANELWHYIEKFAEYGFNKSHAIAYSIISYWMAYLKTHFKAEF
YCALLNGSIKNEVKTSQYLYEIKTAGIRMNGPSIKNPNSTYYYGNQMINMPLNVIKGIGQ
DLVKTIRAIHKKAKNAFESFAKVVAILVSEGLTDKKFEALAYAGAFDAYGYSRKDLANNQ
KEIFNLAQILKYSSTKDLEVDLPIKKDKPELIASYEKEFFGFYVTTHPLSIFRQKMLNSE
KLLYLSSLQREDITCDVFVTVDNIVTKTDKNGGQMCFLDVSDETGSIMVTIFASTFEKIK
SQIEISQNIIIKVKTQLYNNKISALLIDFKKTIK
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
gtgaagtattcaagtttagttaatgtacaatcttgctacaactttttaaaatcagttatt
aaacctgaagattatgttggttttttacaaaaaaatgaaattaaagtaggattttattct
gatctatattcaatgtatggtgcagctgaatttgcaaaacttgcaagttcaagaggagtt
aaaccaataattggtgcagcatttgatgtttcatttggaagaataattttatatgcaaaa
aataataaaggttttaaaagaatctcatacctatcaagtagtgttttaaatgaagacaaa
attgatttgcaaaaattagaacaagaaatatttacaaaagcaggagatgatgtttttgtt
atttttatttctagtgtagagaatcttgataactataaagataaattaaaaaaagtattt
aatgataatcttttttttggaataacaaaaacaaactttcatttctttaaaaatgaaagt
aatttaatttttgcaaatgaagttaattatctttatgaagatgattattttcaatacaaa
gtgttgagagcaattggagaagctaaattattaacagaaactgaaaatatagaaaaaaac
ttttatgtttcaaatgcacaaatgcaaaactatattgatgtacaaaaacataatgaaaat
atttcaaaaattattgaacaagttgaagatgatgttattaatgataatcaagtacacttt
ataaaatttaaagatgccaaaaacgattcatcttcaacttatattgaaaaactttgtaaa
aataaattggttgaattggggttaagtgaaaaccaacaatatagtgaaagattagtttat
gaattagaagtaattaaaaaaatgggatttgaagattactttttaatagtaagtgacatg
ataaatgcagcagaagaaaaaaatattttagttggacctggtaggggttctgcttctgga
agtttagtttcttacttgttaaacattacaaagttagatccaattaaatgagatttactg
tttgaaagatttttgaatgttgacagaataacattaccagatatagatatagactttgaa
gatgagagacgtgaagaagttttagaatacttgtacaaaaagtatggaagagaacacttt
gcaacaattacaacctttcaaacaattggtataaagaatgctattcgagattgtggaagg
gtttttgatttaccaaatgatgatgtaactcacatgacaagattaattggtgataagaat
gttaaagatttagataaagctttagaagaatctagaaatcttacaaaatataaagaaaag
tatcctcaagtttttgaagttataaaaaaaataataggattaccaagacagacaggaact
catgcagctggagttgttttttgtgatgttcctttatgagaagttgttccaaccaaagtt
ggaattaatggtattttacaaacacaattttcaatgaattttttagaagaaataggactt
attaaaacagatattttaggtttaagaaacctttcaattattcaacaagtaatttcttct
gtagaaaaattaaatcaaactaaaattgacttaaaatctttaccattaaatgataaagat
acttttgaactattaagaaatagacaaacaagtgggatttttcaacttgagtcacaaggg
atgaccgaagtattgacaagtatgaaagtaaattcaattgaagacattgcagttacaagt
gccttgtttagaccgggacctcaggaaaatataccaacctatattgcaagaaaaaatgat
aacaacagagaattttcgatcgataaaagtcttacagatattttaggagatacttatggg
attattgtttatcaagaacaagtaatgaaaattcttcaaaaagttgcaaactttgaattg
agtaaagcagatatcgtaagaagagctattggtaaaaaagaccaaaagttaatggcagaa
tttaaaaaagaatttgttcaaggagctttagaaaataaatataatgaaggaagagcaaat
gaactttgacattatattgaaaaatttgcagagtatggttttaataaatctcatgctata
gcatattcaataataagttattgaatggcttatttaaaaactcatttcaaagcagaattt
tattgtgcattattgaatggaagtataaaaaacgaagttaaaacttctcaatatttatat
gaaattaaaactgctggaataagaatgaatggaccaagtattaaaaatccaaactcaact
tattattatggaaatcaaatgataaatatgccattaaacgttattaaaggcataggacaa
gatttggtcaaaactataagagcaattcataaaaaagctaaaaatgcttttgaatcattt
gcaaaagttgttgcaatacttgtttcagaaggtctaactgataaaaaatttgaagcctta
gcatatgcaggagcatttgatgcttatggatatagtagaaaagatcttgcaaataatcaa
aaggaaatctttaacttagctcaaattttaaaatattcatcaaccaaagacttagaggtt
gatttacctataaaaaaagataaacctgaattgatagcaagttatgaaaaagagtttttc
ggtttttatgtaacaactcatcctctttcaatatttagacaaaaaatgttaaacagtgaa
aaattgttatatctttcaagtttacaaagagaagacattacatgtgatgtttttgtaact
gttgacaacatagttacaaaaacagataaaaatggtggtcaaatgtgtttcttggatgtt
tctgacgaaacaggttcaattatggtaacaatttttgcttcaacttttgaaaaaattaag
agtcaaattgaaataagccaaaatattataattaaagtaaaaacacaactatataacaac
aagatttcagcattattaattgatttcaaaaaaacaatcaagtaa
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