Spiroplasma chinense: SCHIN_v1c11000
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Entry
SCHIN_v1c11000 CDS
T06905
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
schi
Spiroplasma chinense
Brite
KEGG Orthology (KO) [BR:
schi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
schi03016
]
SCHIN_v1c11000 (truA)
Enzymes [BR:
schi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
SCHIN_v1c11000 (truA)
Transfer RNA biogenesis [BR:
schi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SCHIN_v1c11000 (truA)
Prokaryotic type
SCHIN_v1c11000 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
RuBisCO_small
DUF2344
Motif
Other DBs
NCBI-ProteinID:
QEH62293
UniProt:
A0A5B9Y658
LinkDB
All DBs
Position
complement(1245827..1246564)
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AA seq
245 aa
AA seq
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MNYYLFTIEYDGTDFCGWAKQKGQSTIQGEIESALSRVARNSTFRVVGASKTDSGVHAND
QKAWVELDFKPNLPGFLKALNNALPLGINIKNAKEIEQSYRVRNCIQKTYHYNLNFGDDD
VFKNRYWFKPKYHIDLDKLTDCLELFVGYHDFKNFSGLKGEEFNIIESKRIVDEIKIVTI
GELVKIVFKAKGFIRYQIRMMMGAALAYATGKTDLNTVKDVLNCKREKLPFMAEAKGLTL
YNIQY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaactattacttatttacaattgaatatgacggaactgatttttgcggttgagccaaa
caaaaaggacaatcaactattcaaggagaaattgaaagcgctttatcaagagtggctaga
aattctacctttagagttgtgggtgctagcaaaacagattctggagttcatgcaaatgat
caaaaagcctgagtggagttggattttaaaccaaatctaccaggttttttaaaagcatta
aataatgcattaccacttgggataaatataaaaaatgcaaaagaaatagaacaaagttat
cgtgtaagaaactgtattcaaaaaacttatcattataatttaaattttggagatgatgat
gtatttaaaaatcgttactgatttaaaccaaaataccatatagatttagataaactaaca
gattgtttagaactttttgttggctatcatgattttaaaaacttttctggattaaaaggt
gaagaatttaatattatagagtcaaaaagaatagttgatgaaataaaaattgtaacaatt
ggtgagttggtaaaaatagtttttaaagcaaaaggctttattagatatcaaatcagaatg
atgatgggtgctgctttagcttatgctacaggaaaaacagatttaaacacagtaaaagat
gttttgaattgtaagcgtgaaaaattaccttttatggcagaagctaaaggtttaacttta
tataatattcaatactaa
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