Streptococcus chenjunshii: DDV21_001860
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Entry
DDV21_001860 CDS
T07265
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
schj
Streptococcus chenjunshii
Brite
KEGG Orthology (KO) [BR:
schj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schj03019
]
DDV21_001860
Messenger RNA biogenesis [BR:
schj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
DDV21_001860
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Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
Motif
Other DBs
NCBI-ProteinID:
AXQ77902
UniProt:
A0A372KNU6
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All DBs
Position
340973..341914
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AA seq
313 aa
AA seq
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MKINQMKKDELFEGFYLIKSAEVRKTRAGKDYIAFTFQDDSGEISGNLWDAQPYNISEFT
AGKVVFMKGRREVYNGTPQVNQIALRLPRDGEPNDPSAFREKPPVDVTDVKDYLEQMMFK
IENAVWQRLVRSLYRKFAKEFFTYPAAKTNHHAFESGLAYHTATMVRLADSIGDIYPELN
KSLLFAGIMLHDLAKVIELSGPDNTEYTIRGNLIGHIALIDEEISKALLELNIDDSKEDV
IVLRHVILSHHGHLEYGSPVRPRIMEAEIIHIIDNLDAEMMMMTTALKRVDEGEMTNRIF
AMDNRPFYKPKSK
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagattaatcaaatgaaaaaagatgagctttttgaaggtttttatctgattaaatcg
gccgaagtccgcaagacacgtgcaggcaaggactatattgcctttacttttcaggatgac
agcggagaaatttcaggtaacctttgggatgctcagccttataatatcagtgaatttact
gcaggcaaagttgtttttatgaaaggccgcagggaagtttacaacgggacgccgcaggtg
aatcagattgcgctgcgcctccctcgtgacggggaaccgaatgaccctagtgcttttagg
gaaaagcctccggtagacgtaaccgatgttaaagattatcttgagcagatgatgtttaaa
attgaaaatgcggtttggcagcgtcttgtccgcagcctctatcgtaaatttgccaaagaa
ttcttcacctatccagctgccaaaaccaatcatcatgcgtttgaatcaggccttgcttat
catacggctaccatggttcgtttagcggacagcatcggagacatttatcctgaattgaat
aagagcctgctttttgccggcatcatgctgcatgatctggctaaggtgattgaactatcc
ggaccggataatacggaatacactatcaggggaaatttgattggccatattgcgcttatt
gatgaggaaatcagcaaagctctattagagctcaatattgatgacagcaaagaagatgtc
attgttctgcggcatgttattctgagccatcatggtcatcttgaatatggcagtcctgtt
cgtccgcggattatggaagcagaaattatccatatcatcgataaccttgatgcagaaatg
atgatgatgacaaccgcactgaaacgtgttgatgaaggagagatgactaaccgtattttt
gctatggacaaccggcctttctataagccaaaatccaagtaa
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