Streptococcus chenjunshii: DDV21_007600
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Entry
DDV21_007600 CDS
T07265
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
schj
Streptococcus chenjunshii
Brite
KEGG Orthology (KO) [BR:
schj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
schj03009
]
DDV21_007600 (rlmD)
Enzymes [BR:
schj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
DDV21_007600 (rlmD)
Ribosome biogenesis [BR:
schj03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DDV21_007600 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_15
Methyltransf_31
Cons_hypoth95
N6_N4_Mtase
Methyltransf_25
MTS
TRM5-TYW2_MTfase
TRM
PrmA
RrnaAD
DOT1
PCMT
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AXQ78958
UniProt:
A0A372KMT4
LinkDB
All DBs
Position
complement(1585487..1586842)
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AA seq
451 aa
AA seq
DB search
MLKKNDIVETEIVDLSHDGQGIAKIDGFVFFVDNALPGEKIRMRVLKVKKTIGFGKVEEY
LSRSPFRNEDLNADYLRTGIADLGHLSYSEQLKFKRKQVIDTLYKTAGISKAEVAETLGM
ENPYAYRNKAQVPVRRVNGQLETGFFRKHSHDLLPISDYYIQNKEIDRLINFTRDLLRRF
DLSPYDEKAQTGLVRNLVVRRGHHTGEMMLVLVTTRPKIFRIDQVIANITAAFPAVKSII
QNINDKNTNAIFGRDFRTLYGKDTIADTVLGHQYDISAPSFYQVNTAMAEKLYQTAIDFS
ELSADDIVIDAYSGIGTLGLSFAKKVKAVYGVEVIEEAVADAKRNAALNGITNAHYVTAS
AEQAMAKWNREGIKPSVILVDPPRKGLTESFIKASVAMAPDKVTYISCNPATMARDIKLY
EALGYKLQKVQPVDLFPMTHHVECVALLVKA
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaaaagaatgatattgtagaaactgagattgttgacttaagccatgacggacag
gggattgccaaaatagacggtttcgtcttttttgttgacaatgctttgcccggagagaag
attcgcatgcgggtgctcaaggttaaaaaaacaattggatttggaaaagttgaggaatac
ttgagccggtcgcccttccgcaatgaagatttgaatgcagactatctgcgcacaggaatt
gcagatttggggcatttgtcttactcagaacagttaaaattcaaacgcaaacaggtgatt
gacactctttataaaacggcaggtatttcaaaagccgaagttgcagagacgcttgggatg
gaaaatccatatgcctaccgtaataaagctcaggtgccggtccgccgtgtcaacggtcag
ctggaaacaggttttttccgcaaacactcccatgatttgctaccgatttcggattattac
attcaaaataaagaaattgaccgtttgattaattttacacgtgatttgctgcgccgtttt
gacctatccccctacgatgaaaaagcacaaacaggccttgtccgtaatcttgttgtccgc
cgcggtcatcacacaggtgagatgatgctggtactggtaacgacgcggccgaaaattttc
cgtattgaccaagtgattgcaaacatcaccgctgcctttcctgctgtcaagtcaattatt
caaaacattaatgataaaaacaccaatgccatttttggcagggattttaggacgctttac
ggcaaagatacgattgctgataccgtgcttggccatcaatacgatatttcagcgccttca
ttctatcaggtcaatacggctatggctgaaaaactctatcaaacggccattgatttttca
gaactaagcgcggatgatattgtcattgatgcttattctggcattggcacactcggttta
tcatttgctaaaaaagttaaggctgtttatggtgtcgaagtcattgaagaagcggttgca
gatgctaagcgcaacgctgctctaaacggcattaccaacgcgcattatgtgactgcttca
gccgaacaggctatggccaaatggaacagagaggggattaaaccaagcgtcattcttgtc
gatccgccgcgcaaagggctgaccgaaagcttcatcaaagccagtgttgccatggcacct
gacaaagtgacctatatctcctgcaatccggccaccatggcgcgtgacatcaagctctac
gaagcacttggctataagttgcagaaagttcagccagtggacttgttcccaatgacacat
catgtggagtgcgtcgctctgctcgtgaaagcctag
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