Shewanella chilikensis: GII14_00335
Help
Entry
GII14_00335 CDS
T08813
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
schk
Shewanella chilikensis
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
schk03009
]
GII14_00335
Ribosome biogenesis [BR:
schk03009
]
Prokaryotic type
ribosomal protein modification factors
GII14_00335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QIJ02772
UniProt:
A0A6G7LLV4
LinkDB
All DBs
Position
70129..72315
Genome browser
AA seq
728 aa
AA seq
DB search
MEIKVNFLDNLRLEAKFDDFSVIADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCV
ARDIPTEGIRLSQNNIVDPENRYNQIFKIQVELPDTISDKDREGILRSIDRCTVKKVVQT
GPEFQLETVDNLDQDAQAMLMLKPDDSHSTFILGKDLPLEQTIANMTNTLAGLGMKIEIS
SWRNLVPNVWSLHIRDAASPKCFTNGKGATKESALCSALGEFIERLSCNFFYNDQYFGPE
IANAEFVHYPNEKWFQPGPNDELPAGILDDYCLEIYNPDGELCGSNLIDTNSGNVERGIC
AIPYVRQSDGEIVYFPSNLIENLYLSNGMSAGNNLDEAKVQCLSEIFERAVKRRIIEEEI
VLPEVPKAVLAKYPSIVAGIEALEAQGFPLVIKDASLGGQFPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVQKPTFNSMAVQEPENFVEHFIDSSGVISWRF
FSSKPDYEFVEWDFSGSNAEESQSLFGILEEMGKEVYIAEFTEIGNACRILVPDFSEVYP
VSDLIWDNTNKALDYREDILNLHRLSDSQLQSLSERLEDSQLDIYTDIITLIGIEFDENT
VWGQLTILELRLLICLAIGELEEALELTETFLQYNNNTVARGLFYQCLQAVLEISLDDEL
ELDDYRYNLGRMFGQETLDAAIGSVNGTVRFYGLTPTNMQLEGLEKHLRLIESYKKLHAA
RARVAAKK
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagtaaattttctcgacaaccttagactcgaagccaagtttgatgacttc
agtgtcattgccgaccagccaatccgctacaagggtgatggctcggcgccgagcccgttc
gactactttctggcttcatcagcgctgtgtgccgcttattttgtgaaggtgtactgtgtc
gcccgcgatattcctaccgaaggcatacgcctgtcgcaaaacaacatagtcgacccggaa
aaccgttataaccagatcttcaagattcaggtggaactgccggacaccatctctgacaaa
gaccgtgaaggcatactgcgttccatcgaccgctgcactgtgaagaaagtggttcagacc
ggccccgagttccagttggaaaccgtggataacctggatcaggacgcccaggcgatgctg
atgcttaagccggatgacagccacagcacctttattctgggtaaggatctgccgctggag
cagaccatagccaacatgaccaacaccttggccggactggggatgaagatagagatctcc
tcctggcgtaacctggtgcccaacgtttggtcgctgcatatccgtgacgccgcttcgccc
aagtgttttaccaacggcaagggcgcaaccaaagagagcgcgctctgctcggctctgggc
gagtttatcgagcgtctcagctgcaacttcttctacaacgaccagtatttcggccccgag
atcgccaacgccgaatttgttcattatcccaatgagaagtggttccagcccggccccaac
gatgagctgccagccgggatccttgatgactattgcctggaaatctacaacccggatggc
gagctctgcggctccaaccttatcgacaccaactcgggcaatgtcgagcgcggcatctgc
gccattccttatgtgcgtcagtccgatggcgagattgtgtatttcccctccaacttgatt
gaaaacctgtatctcagtaatggcatgagcgcaggtaacaacctggatgaggccaaggtg
cagtgtctgtccgagattttcgagcgggcggtgaagcgccgcatcatagaagaggaaatc
gtcctgcctgaggtgccgaaagccgtgctggccaagtatccttcgatagtggccggcata
gaggcgctggaggcgcagggctttccgctggtgatcaaggatgcctccctcggtggccag
ttccccgtcatgtgtgtgaccctgatgaacccccgcaccggcggcgtgtttgcctccttc
ggcgcccaccccagttttgaggtggcgctggagcgcagcctcaccgaactgctgcagggc
cgcagtttcgagggcctaaacgatgtgcaaaagcctactttcaacagcatggcggtgcag
gagccggagaactttgttgaacactttatcgactccagcggggtgatctcctggcgcttc
ttcagtagcaagccggactatgagtttgtcgaatgggacttctccggcagcaacgccgaa
gagagccagagcctgttcgggattcttgaagagatgggcaaagaggtctacatcgccgag
tttaccgagataggcaacgcctgccggatcctggtgccagacttctccgaggtgtatccg
gtatcggatctgatttgggacaacaccaataaagcgctggactaccgagaagatattctt
aacctgcatcgcctcagtgacagccaactgcaaagcctgtccgagcgcctcgaagatagc
caattggatatctacacggatatcatcaccctgataggcatagagtttgatgaaaacacc
gtctggggccaactgacgatactcgagctcagactgctgatctgcctggccataggtgag
ctggaagaagcgctggagctgaccgaaaccttcctgcagtacaacaacaataccgtcgct
cgcggcctcttctatcaatgtttgcaggcggtgttggagatcagcctggacgatgaactc
gagctggacgactaccggtacaacttaggacgcatgttcggccaggaaaccctggatgcc
gccataggttcggtcaatggcacagtgcgcttctacggcctgaccccaaccaatatgcag
ctcgaaggcctggaaaaacacctgcgactgatcgaaagctacaagaagctgcacgccgcc
cgcgccagagtggctgctaaaaagtaa
DBGET
integrated database retrieval system
