KEGG   Shewanella chilikensis: GII14_00390
Entry
GII14_00390       CDS       T08813                                 
Symbol
polA
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
schk  Shewanella chilikensis
Pathway
schk03030  DNA replication
schk03410  Base excision repair
schk03420  Nucleotide excision repair
schk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:schk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    GII14_00390 (polA)
   03410 Base excision repair
    GII14_00390 (polA)
   03420 Nucleotide excision repair
    GII14_00390 (polA)
   03440 Homologous recombination
    GII14_00390 (polA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:schk03032]
    GII14_00390 (polA)
   03400 DNA repair and recombination proteins [BR:schk03400]
    GII14_00390 (polA)
Enzymes [BR:schk01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     GII14_00390 (polA)
DNA replication proteins [BR:schk03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     GII14_00390 (polA)
DNA repair and recombination proteins [BR:schk03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     GII14_00390 (polA)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GII14_00390 (polA)
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 K-box
Other DBs
NCBI-ProteinID: QIJ02782
UniProt: A0A6G7LLW4
LinkDB
Position
complement(85430..88198)
AA seq 922 aa
MPTIAENPLVLVDGSSYLYRAYYAPPHLTNSKGEATGAVYGVVNMLRSLLGKYKPQQMAV
VFDAKGPTFRNDMYTEYKAHRPPMPDDLRSQIAPLHAIIEALGLPLLCIPGVEADDVIGT
LASRASKEGRAILISTGDKDMAQLVDENVTLINTMTDTIMGPEEVTSKFGVGPELIIDLL
ALMGDKADNIPGLPGVGEKTALAMLTGAGGVAKLLQQPDCVTALGFRGAKTMAKKIIDNA
EMLQLSYDLATIKTDCELDLDWHQLNITAPNKDQLTQLYGEMEFKRWLAEVLDNKIPHPL
AVNTAMAETQEETAPQLAIETEYETIQTEAALEKWLKRLTEAELMAVDTETTSLNYMDAE
LVGLSFAVKAGEAAYLPLGHDYPEAPEQLPREQVLAKFKPILENPEIKKVGQNLKYDISI
LANAGIKLAGVAFDTMLESYVFNSVASRHDMDGLALKYLGHKCVSFEEIAGKGAKQLTFN
QIPLETASPYAAEDADITLRLHQHLWPRLEREQELAKVFTELELPLIQVLSQMERDGVLI
DSMQLSQQSDELAQKIDALEQKAYEIAGEKFNLSSPKQLQALFFEKLGYPVIKKTPKGAP
STAEEVLIELALDYPLPKIILEHRSLTKLKSTYTDKLPLMINGKTGRVHTSYHQANAATG
RLSSSDPNLQNIPIRTEEGRRIRQAFIAPSGRKILAADYSQIELRIMAHLSQDAGLLAAF
AEGKDIHRATAAEVFDVAFETVTPEQRRRAKAVNFGLIYGMSAFGLARQLDIPRAEAQSY
MDTYFKRYPGVLKYMEETRALAAEQGYVSTLFGRRLYLPEIRDRNAMRRQAAERAAINAP
MQGTAADIIKKAMIKVADWIASDTKGEITMIMQVHDELVFEVDETKAEELQQQICKLMAE
AATLDVPLLAEAGLGDSWDQAH
NT seq 2769 nt   +upstreamnt  +downstreamnt
atgccaacaatagcagaaaaccccctcgtccttgtggatggttcttcctacctctatcgg
gcctactatgcgccgcctcacctgaccaactccaagggtgaagcaaccggggcggtttac
ggcgtagtcaacatgttgcgcagcttgctgggcaaatacaagccacagcagatggcggtt
gtgtttgatgccaaaggccccacatttcgcaacgatatgtatacagagtataaggctcat
aggcctcccatgcctgatgatctgcgtagtcagatagcgcctctgcatgccatcatcgaa
gccctgggcttaccactcctatgtattcccggcgtagaagccgatgacgtgataggcact
ctggcctcccgggccagtaaagaaggacgtgccattctgatcagcacaggtgataaggat
atggcgcaactggtggatgagaatgtcaccctgatcaacacaatgacagacaccataatg
gggccggaagaggtcaccagtaaatttggcgtcggccccgagcttatcatcgacctgttg
gcactgatgggcgacaaggccgataacatcccgggactgcctggtgtgggtgagaaaacc
gcgttggccatgctgacaggggccggtggtgtcgccaagctactgcagcaaccggattgt
gtcacagctcttggcttccgtggtgccaagaccatggctaagaaaatcatcgataatgca
gaaatgctgcaactctcttacgatctggcgaccatcaagacagattgcgagctggatctg
gactggcaccaactcaatattacggcccccaataaagaccaactgacacagctttatggt
gagatggagttcaaacgttggttggcagaagttctggataacaagataccgcatccgttg
gcggtcaatactgcaatggctgaaacccaggaagaaactgcaccccaactcgccatagag
acagaatacgaaaccatacagaccgaggccgccctggaaaaatggctaaaaaggttaacc
gaggccgaactgatggcggtagataccgaaaccaccagcctcaattatatggatgccgaa
ctggtaggactgtcttttgcagtcaaggcaggagaggcagcctatctacctctggggcac
gattacccggaagcccccgaacaactacctagagaacaggtattagcgaagttcaaaccg
atccttgaaaaccctgagatcaagaaagtcggtcaaaatctaaaatatgacatcagtatt
ctggccaatgccggtatcaagctggccggtgtcgccttcgataccatgctcgaatcctat
gtcttcaattcagtggcatccaggcacgacatggacgggctggcactcaaatacctgggg
cacaaatgcgtcagcttcgaagagattgcaggcaaaggcgccaagcagctgacattcaac
cagatcccactggaaacagcatcgccctatgccgcagaagatgccgatattacccttagg
ctgcatcaacacctatggcccaggctcgagcgggagcaagagttagccaaggttttcact
gaacttgagttgccgcttattcaggtgttgtcacagatggagcgcgacggcgtgctgatc
gacagtatgcaattgtcgcaacagagtgatgagctggcgcaaaaaatagatgcgctggag
caaaaagcctacgagatcgccggagagaaatttaacctcagttcccccaaacaactgcag
gcgctgttcttcgaaaaactgggctatccggtaatcaagaaaaccccgaaaggtgcgcca
tccactgccgaggaagtcttgatagagttggctttggattatccattgccaaagattatt
ctcgagcatcgcagcctgaccaaactcaagagcacctatacagataagttaccgctgatg
ataaatggcaaaaccggtagagtgcacaccagctaccatcaggccaacgccgctaccggc
cgtttgtcatccagcgaccctaacctgcagaatatccctatccgcaccgaagaggggcgt
agaattcgtcaagcctttatcgcaccttcaggacgcaagattttggccgctgactattca
caaattgagctcaggatcatggctcacttgtcccaggatgccgggctactggcagcattc
gccgagggtaaagacattcacagagcaactgcggctgaagtctttgatgtggcgtttgaa
actgtcaccccagaacagcgtcgccgcgccaaggcggttaacttcggtctgatttatggc
atgtcggcctttggcttggcgcgccaactggatattccccgcgctgaagcacaaagctat
atggatacctacttcaagcgttatcccggcgtgctcaagtatatggaagagacccgagca
ctcgccgccgagcaaggctatgtctccacactatttggtagacgcctgtacctaccggaa
atccgtgatcgcaacgccatgaggcgtcaagctgcggaacgggctgcaatcaacgctcct
atgcagggaacagccgctgacatcatcaagaaagcgatgatcaaagttgccgactggata
gcctctgacaccaagggggagatcaccatgatcatgcaggttcacgatgaattggtgttt
gaggtggatgaaacgaaagcagaagagttgcaacaacagatctgcaaactcatggctgaa
gccgctaccctggatgtccctttgctagccgaagcgggcctgggtgatagctgggatcag
gcacactga

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