Shewanella chilikensis: GII14_02155
Help
Entry
GII14_02155 CDS
T08813
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
schk
Shewanella chilikensis
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
schk03009
]
GII14_02155 (rimO)
Enzymes [BR:
schk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
GII14_02155 (rimO)
Ribosome biogenesis [BR:
schk03009
]
Prokaryotic type
ribosomal protein modification factors
GII14_02155 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
NTPase_1
YajR_YAM
Methyltransf_2
UPF0180
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QIJ03090
UniProt:
A0A6G7LMX9
LinkDB
All DBs
Position
complement(450228..451652)
Genome browser
AA seq
474 aa
AA seq
DB search
MKKSVDIFDPKQTTTLDTPAKTLAQENSPAEAQTSGNRIGFVSLGCPKNLVDSERILTQL
RIDGYEVTNSYDNADLVIVNTCGFIDAAVEESLDAVREALEENGKVIVTGCLGAKENQIR
EVHPDVLEITGPHSYEAVLNHVHKYVPKPEHNPFTSLIPQAGVKLTPKHYAYLKISEGCD
NRCTFCIIPALRGDLDSRSVGSVLDEAKRLVESGVQEILVVSQDTSAYGKDKGGRTDFWN
GMPVKQDITTLARHLGKMGVWVRLHYVYPYPWVDELIPLMAEGLILPYLDLPLQHASPRV
LKMMKRPGRVDRQLDAIKKWREICPDLVIRSTFIVGFPGETEEDFEILLDFLREARLDRV
GCFKYSEVDGAVANTLAELISEEVKQDRYERFMQVQAEISAERLARLVGRELDVLIDDVD
EEGAIGRCYADAPEIDGMVFLNGEVELSPGDMVRALITHSDEHDLWAELVQMPE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaatcagtcgacatatttgatcccaagcagaccacgactctggacactccggcc
aagactctggcacaggaaaacagccctgccgaggcccaaaccagcggcaatcgcatcggc
tttgtcagcctgggctgccccaagaacctggtggattccgagcggatcctcacccaactg
cgcatcgacggctatgaggttaccaacagctatgacaatgccgacctggtaatagtcaac
acctgtggctttattgatgccgcggtggaagagtcgctggatgccgtgcgtgaagcgctg
gaagaaaacggcaaggtgatagtcaccggctgcctgggcgccaaggaaaaccagatccgc
gaagtgcatccggatgtactggagatcaccggcccccacagctatgaagccgtgctgaac
catgtgcacaaatatgtgcccaagccggagcacaaccccttcacctcgctgatcccgcaa
gccggggttaagctgacccccaagcattatgcctacctgaagatttccgaaggctgcgac
aaccgctgtaccttctgcatcattccggcgctgaggggcgatctggacagccgcagtgtc
ggcagcgtactggatgaagccaaacgcctggtggaaagcggggttcaggaaattctggtc
gtcagccaggacacctcggcatacggcaaagacaagggcggccgcaccgatttctggaac
ggcatgccggtgaagcaggatatcactaccctggcccgccatctgggtaagatgggtgtg
tgggtacgcctgcactatgtctacccttacccttgggtcgatgagctgatcccgctgatg
gccgaaggactgatcctgccctatctggatctgccgctgcagcatgccagccctcgcgtg
ctcaagatgatgaagcgtcccggccgggtcgaccgccagttggacgccatcaagaaatgg
cgtgagatctgcccggatctggtgatccgctcaacctttatcgttggcttccccggtgaa
accgaagaggatttcgaaatcctgctggacttcctgcgtgaagcaaggctggaccgcgta
ggctgcttcaagtactcggaagtcgatggcgccgtggccaataccttggccgagcttatc
agtgaagaggtcaagcaggaccgctatgagcgtttcatgcaggtgcaggccgagatcagt
gccgagcggctggcgcgcctggtaggccgtgagctggatgtcctcatcgatgatgtggac
gaggaaggcgccattggccgctgctatgccgatgcgcctgaaatcgacggcatggtattc
ttaaacggggaagtggaactgagcccaggggacatggtgcgcgcactgatcactcattct
gatgagcacgatctgtgggccgaactggtgcagatgccggaataa
DBGET
integrated database retrieval system
