Shewanella chilikensis: GII14_02385
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Entry
GII14_02385 CDS
T08813
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
schk
Shewanella chilikensis
Pathway
schk03030
DNA replication
schk03430
Mismatch repair
schk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GII14_02385 (ssb)
03430 Mismatch repair
GII14_02385 (ssb)
03440 Homologous recombination
GII14_02385 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schk03032
]
GII14_02385 (ssb)
03400 DNA repair and recombination proteins [BR:
schk03400
]
GII14_02385 (ssb)
03029 Mitochondrial biogenesis [BR:
schk03029
]
GII14_02385 (ssb)
DNA replication proteins [BR:
schk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GII14_02385 (ssb)
DNA repair and recombination proteins [BR:
schk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
GII14_02385 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
GII14_02385 (ssb)
Mitochondrial biogenesis [BR:
schk03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
GII14_02385 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
Lin-8
Motif
Other DBs
NCBI-ProteinID:
QIJ03131
UniProt:
A0A6G7LMY2
LinkDB
All DBs
Position
505998..506699
Genome browser
AA seq
233 aa
AA seq
DB search
MASRGVNKVILVGNLGQDPEVRYMPNGNAVANITVATSESWKDQQGQQQERTEWHRVVMF
GKLAEIAGEYLRKGSQVYLEGKLQTRKWKDQSGQDKYTTEVVVDMGGTMQMLGGRNQNQG
GMSQGGNQGGMNQNQGGYGGGQAQSQYNAPQQSGGYQPKPAQQPQQPQQPQQQYNAPQQQ
SYGQQQNSGYAPKPQQPAPQQAAPQQRPAPQPQPQQQNYTPDLDDGWDDDIPF
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggccagtcgtggtgttaataaggtaattctggtgggcaatctggggcaggacccagag
gtgcgctacatgccaaacggcaacgccgtagcgaatatcacagtggccaccagtgagtca
tggaaggaccaacagggccaacagcaagagcgtaccgagtggcacagggttgtcatgttc
ggcaagctggctgaaattgccggtgagtacctgcgcaaaggctcacaagtgtatctggaa
ggcaagctgcagacccgcaagtggaaagatcagagcggtcaggataagtacaccactgaa
gtggttgtcgatatgggcggtaccatgcagatgctgggtggccgtaaccaaaatcaaggt
ggtatgagccagggcggcaatcagggcggtatgaaccaaaaccaaggtggttacggcggt
ggtcaggcacagtctcaatacaatgcgccacagcagtccggcggctatcagcccaagcct
gctcagcaaccacaacagccacagcaaccacagcagcagtacaacgcgccgcagcagcaa
agctatggtcagcagcagaactcaggttatgcgcccaagccacagcagccagcgccacaa
caggcggctccacagcagcgtccggcaccacagcctcagccacaacagcagaactacacg
ccggatctggatgacggctgggatgatgatatcccattctga
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