Shewanella chilikensis: GII14_03090
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Entry
GII14_03090 CDS
T08813
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
schk
Shewanella chilikensis
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schk03032
]
GII14_03090
03036 Chromosome and associated proteins [BR:
schk03036
]
GII14_03090
03400 DNA repair and recombination proteins [BR:
schk03400
]
GII14_03090
DNA replication proteins [BR:
schk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GII14_03090
Chromosome and associated proteins [BR:
schk03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GII14_03090
DNA repair and recombination proteins [BR:
schk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GII14_03090
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
TFIIB
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
QIJ03263
UniProt:
A0A6G7LN88
LinkDB
All DBs
Position
complement(667175..667447)
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AA seq
90 aa
AA seq
DB search
MNKTELIAKMAEHANLSKAEAARALKSFEVAVTDAMKEGSKISIVGFGSFETSTRAARTG
RNPQTGKEIQIPAATIPKFKAGKALRDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaactgaactgatcgcaaaaatggcagaacatgcaaacctgtccaaagcagaa
gctgcccgcgccctcaagtcgttcgaagtagcagtgactgatgccatgaaagaaggatct
aaaatctccatcgtaggctttggttctttcgaaacctcaacccgcgcggcccgcactggc
cgtaatccgcaaaccggtaaagagatccagatccctgccgctacgattcccaagttcaag
gccggtaaggcactgcgtgacagcgtcaactaa
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