Shewanella chilikensis: GII14_03880
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Entry
GII14_03880 CDS
T08813
Name
(GenBank) L,D-transpeptidase family protein
KO
K19235
L,D-transpeptidase YbiS
Organism
schk
Shewanella chilikensis
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
schk01002
]
GII14_03880
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
schk01011
]
GII14_03880
Peptidases and inhibitors [BR:
schk01002
]
Cysteine peptidases
Family C82
GII14_03880
Peptidoglycan biosynthesis and degradation proteins [BR:
schk01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
GII14_03880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
QIJ03402
UniProt:
A0A6G7LNP5
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All DBs
Position
complement(834056..834970)
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AA seq
304 aa
AA seq
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MTRIPRLALLLGLLLPACLSQAVEYPLPPEGSSIVGDNQYYVVPDDKRTLESVADEYQLG
LTNMTEANPGVDPFLPKPRSTLLIPHKLILPDAPRKGIVINVAEMRLYYYPKDSNTVQVL
PIGIGQIGRDTPENWVTKVYRKRANPTWTPTARIRKEYAANGITLPKVWPAGPDNPMGLY
ALYIGNLYAIHGTNASFGIGLRVSQGCVRLRNQDIEHLFNTVPNGTRVQFVNQPIKASLE
PDGGRYLEVHQPLSRTEAEFESTAPVVLKMTPAISRFIAHADTDSTVLKRLLDDRSGIPT
RLNP
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaattccccgcctcgccctgttactgggcctgttgcttcccgcctgcctgtcg
caggccgttgaatatcctctgccgcccgaaggcagcagtatcgtcggtgacaaccagtat
tatgtggtgccagatgacaagcgcacactggagagtgttgccgacgaatatcaactggga
ctaaccaacatgaccgaggccaacccaggggtcgacccttttcttcccaagccacgcagc
acattactgatccctcacaagctgatcctgccggatgcccctcgtaaagggatagtgatc
aacgtggccgaaatgcgcctctactactatcccaaagacagcaatacggtacaggtctta
cccataggcataggtcagataggccgggataccccggaaaactgggtgaccaaggtttat
cgcaaacgtgccaaccccacctggaccccaacggccaggatccgcaaggaatatgccgcc
aacggtatcaccctgcccaaggtatggcctgcaggcccggataaccccatgggcttgtat
gcactttatatcggtaacctgtatgccattcacggcaccaatgccagcttcggtatcggc
ctgcgtgtcagccaaggttgtgtccgcctgcgcaatcaggatatcgaacatttgttcaat
actgtgcccaacggcacccgggtacagtttgtcaatcagccgataaaggccagcctggag
ccggatggaggtcgctatctggaagtgcatcagccgctgtcgcgcaccgaggccgagttt
gaatccaccgcacctgtggtattgaagatgaccccggccatcagccgctttatcgcccat
gccgacaccgactccaccgtgctcaaacgcctgttggatgacagaagcggtatccctacc
cgcctcaacccctga
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