Shewanella chilikensis: GII14_05285
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Entry
GII14_05285 CDS
T08813
Symbol
nusA
Name
(GenBank) transcription termination/antitermination protein NusA
KO
K02600
transcription termination/antitermination protein NusA
Organism
schk
Shewanella chilikensis
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schk03021
]
GII14_05285 (nusA)
03009 Ribosome biogenesis [BR:
schk03009
]
GII14_05285 (nusA)
Transcription machinery [BR:
schk03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
GII14_05285 (nusA)
Ribosome biogenesis [BR:
schk03009
]
Prokaryotic type
rRNA transcription factors
GII14_05285 (nusA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
HHH_5
S1
KH_NusA_C
DUF2187
DUF4332
Glyoxalase_4
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
QIJ03651
UniProt:
A0A6G7LPF0
LinkDB
All DBs
Position
1128576..1130075
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AA seq
499 aa
AA seq
DB search
MNKDILLVAEAVSNEKAVPREKIFEALEIALATATKKKYEGDIDVRVAIDRKTGDYETFR
RWLVVDDNGEALENPYREITLEAARYENPEIQPGEFIEDEIDSVQFDRITTQTAKQVIVQ
KVREAERAQIVEQFIDKEGELVTGVVKKSNRDSVVVDLGNNADGVLFKEDLISRETFRPG
DRVRSLLYAVRPEARGAQLFLTRTKPEMLIELFRVEVPEIADEMIEVMGAARDPGSRAKI
AVKSNDRRIDPIGACVGMRGARVQAVSNELGGERVDIVLWDDNPAQFVINAMAPADVASI
IVDEDNHSMDIAVEADSLAQAIGRNGQNVRLATQLTGWVLNVMTVEDMNKKHQAESAKVM
ELFVGALDVDEDFAQVLADEGFTSLEEVAYVPVSELLAIEGFDEDIVAALRERAKAALST
RALASEEALDGAEPSEELLSMPGMERHLAYVLASMGVITLEDLAEQGIDDLIEIEELTEE
KAGELIMAARNICWFGEEA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgaataaagatattttgctggtcgctgaagcggtttccaacgaaaaggctgtaccgcgc
gaaaagattttcgaggcgctcgaaattgcgctggctaccgcaaccaagaaaaagtatgaa
ggcgatatcgatgttcgtgttgccatagatcgcaaaactggcgattacgagactttccgt
cgctggttggtggttgatgataacggtgaagcgttggaaaacccttaccgtgaaatcact
ctggaagcggctcgttatgagaaccctgagatccagcctggcgagttcattgaagatgaa
atcgattcggtacaatttgaccgtattactactcaaaccgccaagcaggtaatagtacag
aaagtccgtgaagccgagcgcgcccaaatcgtcgagcagtttatcgacaaagaaggtgag
ttggttaccggtgtggtcaaaaagagcaaccgcgacagcgtagtggttgatctcggcaac
aacgccgatggcgtgctgttcaaagaagacctgatctcccgtgagactttccgtcctggt
gaccgggtacgctcgctgctgtatgctgtgcgtcctgaggctcgtggtgctcagttgttc
ctgacccgcaccaagcctgaaatgttgatcgaactgttccgtgttgaagtaccggaaatt
gccgatgagatgatcgaagtgatgggcgccgcccgcgacccaggttcacgtgccaagatc
gccgtgaaatcaaacgatcgtcgtatcgaccctatcggggcttgcgtcggtatgcgcggt
gcccgggtgcaggctgtatccaatgaacttggtggcgagcgtgttgacatagtgctgtgg
gacgataacccggcacaatttgttatcaacgctatggcaccagccgatgtggcctcaatt
attgttgacgaagataaccactcaatggatatcgccgtcgaagccgatagtctggcacaa
gctatcggccgcaatggtcaaaacgttcgtttggcgacacagctgacaggctgggtactg
aacgtgatgacagtggaagacatgaacaagaaacatcaggccgaaagcgccaaagtgatg
gagctgttcgtgggtgcgttggatgtggacgaagatttcgcccaggtgctggccgacgaa
ggattcacctctctggaagaggtggcttatgttcctgtttccgagctgttggccatcgaa
ggatttgatgaggacatagttgccgcattgcgtgagcgcgccaaggctgccttgtctacc
cgtgcactggcatccgaagaagcactggatggtgccgaacctagcgaagagttgttgtcc
atgcctggaatggagcgccacctggcgtacgttttggcaagtatgggtgtgataactctg
gaagatttagccgagcaaggcattgacgatttgatcgaaattgaagaattgacagaagaa
aaagcaggtgagctcatcatggcagcccgcaacatctgttggtttggcgaagaagcatag
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