Shewanella chilikensis: GII14_05300
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Entry
GII14_05300 CDS
T08813
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
schk
Shewanella chilikensis
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
schk03016
]
GII14_05300 (truB)
Enzymes [BR:
schk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GII14_05300 (truB)
Transfer RNA biogenesis [BR:
schk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GII14_05300 (truB)
Prokaryotic type
GII14_05300 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QIJ03654
UniProt:
A0A6G7LPL1
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All DBs
Position
1133228..1134181
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AA seq
317 aa
AA seq
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MARRPKGRLVDGIVLLDKDTGMSSNFALQRVKRIYNAAKAGHTGALDPLATGMLPICLGE
ATKFSQHLLDADKRYLVTAKLGQRTDTSDSDGEVVQTRPVEFSMAQLEPALEHFRGDSMQ
VPSMYSALKYQGQPLYKYAREGKEVPREARPIHVYELKFISWENDELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVAGYPYERMVSLAQLEALLEQAMTEERVPSELLDPLL
LPMDTAVADLPECNVPDAMAGYLLNGNPVRVAKLEADTLVRITLGDSKRFIGVGMMNDDG
LLAPKRLVVLPEAKSRA
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtcgtcccaaaggccgtttggtcgatggtatcgtcctgttggataaagacact
ggcatgagttccaactttgccctgcaaagggtaaagcggatctacaatgccgccaaggcc
ggccataccggcgcgctggatcctctggcgaccggtatgctacccatctgtcttggcgaa
gccaccaagttttcccagcatctgttggatgctgataaacgctatctggtgacagctaag
cttggacagcgaactgataccagcgattcagacggtgaagtggtgcaaactaggccggtt
gagttttccatggctcaattggaaccggcgctggagcattttcgtggcgatagcatgcag
gtgccttccatgtactcggcactcaagtatcagggccaacccttgtacaagtacgcccgt
gaaggcaaggaagtgcctcgcgaagccaggcctattcacgtttatgagctcaagttcatc
tcttgggagaatgacgagctgacgctggatattcactgctccaagggcacttatattcgc
accataatagatgacttgggggaaatgcttggctgcggcgcccatgtgatcatgctgcgc
cgtactcaggtggcgggttatccctatgagcgtatggttagtctggcacagctcgaagcc
ttgctggaacaggccatgaccgaagagcgggtgccttctgagctattggaccctttgctg
cttcccatggatacggcggttgccgatcttcccgagtgcaacgtccccgacgccatggcc
ggttatttgcttaatggtaacccggtgcgggttgccaagctggaagcagatactctggtg
cggatcaccttgggtgacagcaagcgcttcattggtgtcggcatgatgaatgacgatggt
ttgttggctcctaaacgcttggtagtgttacctgaggcaaaaagccgagcttga
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