KEGG   Shewanella chilikensis: GII14_05300
Entry
GII14_05300       CDS       T08813                                 
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
schk  Shewanella chilikensis
Brite
KEGG Orthology (KO) [BR:schk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:schk03016]
    GII14_05300 (truB)
Enzymes [BR:schk01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     GII14_05300 (truB)
Transfer RNA biogenesis [BR:schk03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    GII14_05300 (truB)
 Prokaryotic type
    GII14_05300 (truB)
SSDB
Motif
Pfam: TruB_N TruB_C_2 TruB-C_2 Pus10_C
Other DBs
NCBI-ProteinID: QIJ03654
UniProt: A0A6G7LPL1
LinkDB
Position
1133228..1134181
AA seq 317 aa
MARRPKGRLVDGIVLLDKDTGMSSNFALQRVKRIYNAAKAGHTGALDPLATGMLPICLGE
ATKFSQHLLDADKRYLVTAKLGQRTDTSDSDGEVVQTRPVEFSMAQLEPALEHFRGDSMQ
VPSMYSALKYQGQPLYKYAREGKEVPREARPIHVYELKFISWENDELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVAGYPYERMVSLAQLEALLEQAMTEERVPSELLDPLL
LPMDTAVADLPECNVPDAMAGYLLNGNPVRVAKLEADTLVRITLGDSKRFIGVGMMNDDG
LLAPKRLVVLPEAKSRA
NT seq 954 nt   +upstreamnt  +downstreamnt
atggcgcgtcgtcccaaaggccgtttggtcgatggtatcgtcctgttggataaagacact
ggcatgagttccaactttgccctgcaaagggtaaagcggatctacaatgccgccaaggcc
ggccataccggcgcgctggatcctctggcgaccggtatgctacccatctgtcttggcgaa
gccaccaagttttcccagcatctgttggatgctgataaacgctatctggtgacagctaag
cttggacagcgaactgataccagcgattcagacggtgaagtggtgcaaactaggccggtt
gagttttccatggctcaattggaaccggcgctggagcattttcgtggcgatagcatgcag
gtgccttccatgtactcggcactcaagtatcagggccaacccttgtacaagtacgcccgt
gaaggcaaggaagtgcctcgcgaagccaggcctattcacgtttatgagctcaagttcatc
tcttgggagaatgacgagctgacgctggatattcactgctccaagggcacttatattcgc
accataatagatgacttgggggaaatgcttggctgcggcgcccatgtgatcatgctgcgc
cgtactcaggtggcgggttatccctatgagcgtatggttagtctggcacagctcgaagcc
ttgctggaacaggccatgaccgaagagcgggtgccttctgagctattggaccctttgctg
cttcccatggatacggcggttgccgatcttcccgagtgcaacgtccccgacgccatggcc
ggttatttgcttaatggtaacccggtgcgggttgccaagctggaagcagatactctggtg
cggatcaccttgggtgacagcaagcgcttcattggtgtcggcatgatgaatgacgatggt
ttgttggctcctaaacgcttggtagtgttacctgaggcaaaaagccgagcttga

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