Shewanella chilikensis: GII14_05720
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Entry
GII14_05720 CDS
T08813
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
schk
Shewanella chilikensis
Pathway
schk03420
Nucleotide excision repair
schk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GII14_05720
03430 Mismatch repair
GII14_05720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schk03400
]
GII14_05720
Enzymes [BR:
schk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GII14_05720
DNA repair and recombination proteins [BR:
schk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GII14_05720
MMR (mismatch excision repair)
Other MMR factors
GII14_05720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_16
AAA_22
UvrD_C_2
UvrD_C
SLFN-g3_helicase
DEAD
nSTAND3
AAA_30
AAA_11
ATPase
NACHT
NTPase_1
AAA_29
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QIJ03729
UniProt:
A0A6G7LPN4
LinkDB
All DBs
Position
complement(1223306..1225066)
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AA seq
586 aa
AA seq
DB search
MNEPCLLRDSILACEGHALVTGGPGSGKTTIALRKAVKRIQQGMTPGQSALFLSFSRAAV
ARILDAAKLEATAAEQEQLSIQTFHSFFWDILKAHAYLLGAPRKLSILLPQDEKALSGGI
DDEDDEWDKWLIERERLFCEEGRIAFDLFAPNATRLLATSSHLLSSLARRHPIIIVDEAQ
DTGQFAWQCIEMLAPHAQIVCLADLEQQIFDYLPGVGPERIAAIRAALRPLEVDLGTQNH
RSPDSEILIFANDILAGQARGAPYKGISSFSYRPENPTPNWNHVLRRAIAQLLSKIRAES
DSRPQTLAILVSNNRSALRMSNALNAIEPNVGKAVRHKLLFDEAEALLSARFAAFLLEPK
DLAQLELDVAASMELIAAARRATGQAKAAVSKLLEQAGKIRGGKTLNINIVKALRGLISG
LHADGFTGDPATDWLTVKYALRATGQNELLRVASQLDFLVAFRRGHRISAGLANEWLRDG
AYTNARLALDQALAQEQILDGIEAPAGLQVMNFHKAKGKQFDGVVIVREARRTAAGVQSS
FVWRGDEAPHPKSRKVLRVGITRARIHTLIVNPMWPACPILRGHKL
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagccttgtctgcttcgcgacagtatccttgcttgcgaagggcacgcactggtg
acaggtggccctggcagcggcaagacgaccattgcattgcgaaaggcggtcaagcgtatt
caacagggaatgacgcctgggcagtccgctctcttcctgagcttctcacgcgctgcagtg
gctcgcatcctcgacgcggccaagctagaagctacagcggccgagcaagagcaactttcg
attcaaaccttccactccttcttctgggacatcctcaaggcgcacgcgtacctgctcggt
gctccgcgcaaactgtcgattttgctgccacaggatgagaaggctctgagcgggggcatc
gacgacgaggatgacgaatgggataaatggctgattgagcgcgagcggctgttctgcgaa
gagggccgcatcgcgttcgacctgttcgctccgaacgcgacccgcctactagccaccagc
agccacttgctttcgtcgctcgcgcggcggcatcccatcatcatcgttgacgaggcccag
gacaccgggcaattcgcgtggcaatgcattgagatgcttgctccacacgcgcagatcgtt
tgcctcgccgacctcgaacaacaaatcttcgattacctacctggcgttggaccagaacgg
atcgcagcgattcgtgctgcacttcgtccactcgaagttgatctgggtactcagaaccat
cgcagcccagattctgaaatattgatatttgccaacgacattctggccgggcaggcacgc
ggtgcgccctataaagggatttcttccttttcctatcggcctgaaaacccaacgccgaac
tggaaccatgtgctacgacgcgccatagctcagttgctgtcgaaaatccgcgcggagtcc
gatagccgaccccaaacgctcgcaatattggtgtcaaacaacagaagtgcgctacgcatg
tccaacgcgctcaacgcaatcgaaccgaatgtaggcaaggctgtgcgccacaagctgttg
ttcgacgaggccgaggccctactatcggcacgatttgcggcgtttctgcttgagcccaaa
gaccttgctcagctcgagctcgatgtggcagccagcatggagctgatcgccgctgcgcgg
cgggcgaccggacaagctaaggccgccgtgagcaaacttttggagcaggcgggaaaaatt
cgaggcggcaagaccctcaacatcaacatcgtgaaagcgttgcggggcctaatttcaggt
cttcacgccgacggcttcaccggagaccccgccaccgactggcttaccgtcaaatacgct
cttcgagccactggccaaaatgagttgctgcgtgtggcttcccagcttgacttcctagtc
gccttccgacgcggacatcgaatttcagcaggcttagccaacgaatggctgcgcgacggt
gcctacacgaacgctcggttagcgttagatcaggcccttgcacaagagcaaattttggat
ggtatcgaggctcctgccgggctccaggtgatgaactttcataaggccaagggtaagcag
ttcgatggagttgtcattgtccgagaagcacggcgcacggctgccggagtacagtcttcc
ttcgtttggcgaggagatgaggcaccacatcctaaaagccgcaaagtcctgcgcgtgggg
atcacccgtgctcgtatccacactttgatcgtcaatcccatgtggccggcctgtccaatc
ctgcgaggacataagttgtag
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