Shewanella chilikensis: GII14_06640
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Entry
GII14_06640 CDS
T08813
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
schk
Shewanella chilikensis
Pathway
schk03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
GII14_06640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schk03019
]
GII14_06640
03009 Ribosome biogenesis [BR:
schk03009
]
GII14_06640
03036 Chromosome and associated proteins [BR:
schk03036
]
GII14_06640
Enzymes [BR:
schk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
GII14_06640
Messenger RNA biogenesis [BR:
schk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GII14_06640
Ribosome biogenesis [BR:
schk03009
]
Eukaryotic type
90S particles
RNase
GII14_06640
Prokaryotic type
rRNA processing factors
GII14_06640
Chromosome and associated proteins [BR:
schk03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
GII14_06640
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DUF2799
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QIJ03886
UniProt:
A0A6G7LPX8
LinkDB
All DBs
Position
1425539..1426222
Genome browser
AA seq
227 aa
AA seq
DB search
MREPVKNFARLCRTLGYEFNNMALLEQAMTHRSAANKHNERLEFLGDSILSIVISDALYH
QFPRATEGDLSRMRATLVRGDTLAIIAKEFKLGDYLTLGPGELKSGGFRRESILADAVEA
IIGAIYLDSDLETCRPLLLGWYQQRLKAIQPGVSQKDAKTQLQEYLQGYKKPLPEYTVVA
VSGEAHDQTFTVECRIEELDQAVSGTGSSRRKAEQQAAAGILELLKK
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgagagaacctgtgaagaattttgcccgtctgtgtcgtactctggggtatgaattcaat
aacatggcactgctggagcaggccatgactcacagaagtgcggctaataagcataacgag
cggttggagtttctcggagactctatcctgtcgatagtgatttccgatgccttgtatcat
cagttccccagggcgaccgaaggcgatctcagccggatgcgtgccaccttggtgcggggt
gataccctggcgataattgccaaagagtttaagctgggtgattatctgaccctgggcccg
ggcgagctcaagagcggtggttttcgccgcgaatccattctcgccgatgcggtggaggcc
atcataggtgccatctacctggactcagatctggaaacctgtcgaccattgctcttgggc
tggtaccagcagcgactgaaggcgattcagcccggggtcagtcaaaaagatgccaagacc
cagctgcaggaatacctgcagggctataagaaacctctgcctgagtatacagtggtggcg
gtttccggcgaggcgcacgatcagacctttaccgtcgaatgccgtatcgaagagctggat
caagccgtatccggcaccggcagttcacgcagaaaagccgagcagcaagccgctgctggg
atattggagctactgaaaaaatga
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