KEGG   Shewanella chilikensis: GII14_06640
Entry
GII14_06640       CDS       T08813                                 
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
schk  Shewanella chilikensis
Pathway
schk03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:schk00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    GII14_06640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:schk03019]
    GII14_06640
   03009 Ribosome biogenesis [BR:schk03009]
    GII14_06640
   03036 Chromosome and associated proteins [BR:schk03036]
    GII14_06640
Enzymes [BR:schk01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     GII14_06640
Messenger RNA biogenesis [BR:schk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GII14_06640
Ribosome biogenesis [BR:schk03009]
 Eukaryotic type
  90S particles
   RNase
    GII14_06640
 Prokaryotic type
  rRNA processing factors
   GII14_06640
Chromosome and associated proteins [BR:schk03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     GII14_06640
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM DUF2799 DSRM_2
Other DBs
NCBI-ProteinID: QIJ03886
UniProt: A0A6G7LPX8
LinkDB
Position
1425539..1426222
AA seq 227 aa
MREPVKNFARLCRTLGYEFNNMALLEQAMTHRSAANKHNERLEFLGDSILSIVISDALYH
QFPRATEGDLSRMRATLVRGDTLAIIAKEFKLGDYLTLGPGELKSGGFRRESILADAVEA
IIGAIYLDSDLETCRPLLLGWYQQRLKAIQPGVSQKDAKTQLQEYLQGYKKPLPEYTVVA
VSGEAHDQTFTVECRIEELDQAVSGTGSSRRKAEQQAAAGILELLKK
NT seq 684 nt   +upstreamnt  +downstreamnt
gtgagagaacctgtgaagaattttgcccgtctgtgtcgtactctggggtatgaattcaat
aacatggcactgctggagcaggccatgactcacagaagtgcggctaataagcataacgag
cggttggagtttctcggagactctatcctgtcgatagtgatttccgatgccttgtatcat
cagttccccagggcgaccgaaggcgatctcagccggatgcgtgccaccttggtgcggggt
gataccctggcgataattgccaaagagtttaagctgggtgattatctgaccctgggcccg
ggcgagctcaagagcggtggttttcgccgcgaatccattctcgccgatgcggtggaggcc
atcataggtgccatctacctggactcagatctggaaacctgtcgaccattgctcttgggc
tggtaccagcagcgactgaaggcgattcagcccggggtcagtcaaaaagatgccaagacc
cagctgcaggaatacctgcagggctataagaaacctctgcctgagtatacagtggtggcg
gtttccggcgaggcgcacgatcagacctttaccgtcgaatgccgtatcgaagagctggat
caagccgtatccggcaccggcagttcacgcagaaaagccgagcagcaagccgctgctggg
atattggagctactgaaaaaatga

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