Shewanella chilikensis: GII14_08530
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Entry
GII14_08530 CDS
T08813
Name
(GenBank) IS3 family transposase
Organism
schk
Shewanella chilikensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
rve
HTH_21
rve_3
HTH_Tnp_1
rve_2
Sigma54_DBD
Motif
Other DBs
NCBI-ProteinID:
QIJ04196
UniProt:
A0A6G7LQU2
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Position
join(1843952..1844234,1844234..1845168)
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AA seq
405 aa
AA seq
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MNKRTTYSAEVRERAVRMVLTSEHDHPSRWAALVSISSKIGCTPETLRAWVNRIEVDSGK
RPGVTTDAAAKIKQLERENKELKQANEILKKAAAFFCPSGARPQTEEIVQFIDSHRALHG
VEPICRVLQIAPSTYFRCKSLAAQPQLRCQRYHQDEALKPEILRVWQDNRQCYGIRKVWK
QLKREDFTVARCTVARLMSTLGIQGVRRGRRCVTTIPDESAAKPLDLVNREFTASRPNQL
WVADITYVATWSGFVYVAFVTDVFSRKVVGWRVMKSMQTQLILDALEQALWARGKPKGVI
HHSDRGSQYVSIRYSERLSEAGFTASVGSVGDSYDNALAETINGLYKAEVIYKDGPWRGL
EQVELATLDWVDWFNNRRLLGSIGDIPPAEYEENYYRQLRQDTAA
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagagaacaacttattccgcagaagtccgcgaacgcgcagttcgtatggtttta
acctcagagcatgatcacccttccaggtgggcagcgctggtgtctatttcatcaaaaatt
ggctgtacacctgagacattaagggcttgggttaatcgaattgaggtggattcaggcaaa
aggcctggagttaccaccgatgccgcagccaagatcaaacaacttgagcgagagaacaaa
gagcttaagcaggccaacgagatcctgaaaaaagctgctgcgtttttttgcccaagcgga
gctcgaccgcaaaccgaagaaatagtccagttcattgattcgcaccgagcgttgcatggt
gtcgagccgatttgtcgtgtgctgcaaatcgcgccatcaacgtatttccggtgcaagtca
cttgcagcccagccacagctgcgctgtcagcgttatcatcaggatgaggcgttaaagcca
gagattctgcgcgtatggcaggacaatcggcaatgctatggcatcaggaaggtctggaag
caactgaagcgagaagactttacagtagcccgctgtactgttgccagactgatgagcact
cttgggatccagggcgtgcgacgaggacgtcgttgtgtcacaacgatccctgatgagagt
gctgctaagccgctggatctggttaaccgggagtttacggcaagtcggccaaaccagctt
tgggtggcagatattacctatgtggccacttggtcaggcttcgtttacgtcgccttcgtc
accgacgtgttctcccgtaaagttgtgggctggagggtaatgaagtcgatgcagacgcag
ttaattctggatgcactggaacaggctttatgggccaggggcaagcctaaaggcgttatt
catcacagcgacagaggaagccagtatgtctcgatacgatactcagaacgattatcagaa
gcaggctttaccgcgtctgtcggcagcgttggtgactcgtatgacaatgcattagccgag
acgataaatggcctgtacaaagccgaggtcatttataaagacggcccttggcgagggttg
gagcaggtcgagcttgcaacgctggattgggttgactggtttaacaacagaagattactg
ggctcgattggcgatatcccgccagctgaatatgaggaaaactattatcgacaattaagg
caagatacggcagcatga
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