Shewanella chilikensis: GII14_10400
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Entry
GII14_10400 CDS
T08813
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
schk
Shewanella chilikensis
Pathway
schk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GII14_10400 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schk03400
]
GII14_10400 (recC)
Enzymes [BR:
schk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GII14_10400 (recC)
DNA repair and recombination proteins [BR:
schk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GII14_10400 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QIJ04521
UniProt:
A0A6G7LRX9
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All DBs
Position
complement(2268738..2272421)
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AA seq
1227 aa
AA seq
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MFTLIQSNKMELLSATLADRLRDGVPGMSPLSCEQILVQSPGMSTWLRLELARHNGVAAA
QEFPLPSSFIWQLCYLLLDDVPKENPFTKAAMTWKLMALLPSLLDRDNFAPLRHYLGDDV
ELKLFQLSGRIADIFDQYLVYRPEWILGWEQNESPLEIAPQHAWQPELWRELVRYNNQEL
QQSHYHRANLHQALIETLTGGSDHALEDLPPRLFVFGISSMAPQTLDVLYALASRIEVVM
LSLSPCRHYWGDIIEPRARARMALAFEGKKQLPELWEDKLEVGNPILANNGRLGRELLDM
VLELPPERLELEELFHPGNTDTLLGGIQNDILEMETLGEPLGPDVSKYLNIARRRPLAAT
DDSITLRSCHSPLREVETLHDHLLHRLRSDPSLAAKDIMVMLPDVAAYAPYIDAVFSAKS
GDHFIPYAIADRGAAQESPLIAGFLNLLALDKSRFGLTDIISILEVPAVLARFGIAQEEL
EQLKGWLKAAGIRWGRDSHNREELGLPGFDKHSWAFGIRRMLLGYALGDDAELYQGDLPL
AGIEGQSAQALGKLLNFIEALDDFREELKQQTPPDERVAQLNALLDAFYLAQEDDAREEI
NDIRQAIDRFAEELRLSGFSGVLPLTVVWQWFNSTLSESRVGQRYLAGSVNFCTLMPMRS
IPFRQVCLLGMNDGVYPRVQHPVGFDLTAHEKPRRGDRSRRLDDRYLFLEALLSARDQLY
ISYIGHSERDNSERIPSMLVSELLEYIQLCYRPDEAQFTPSSVPTDADEIAALGDLAADA
LMQRLIIQQPLQPFDARLYSDSELPGSFATQWCPREMFAAQSPAPFIEHELGEETGLKEP
ELELSALIRFFRNPAQYFCQRVLQLDLRLDIDSQDNDEPFELNALQRYQLQLLMMQDALE
DERGELDETLLDKLKAEGLLPMAPFDDLLLDQYRRDIAPAVERTRFLRAELPKPDAIEIA
LKLEVNGRELLLCGRIEDCYPKGLVNLRPGTTKPKDLLSLYIRHLCLNASGIHRHSYLLD
AGHFHAMAPLKAESAKALLGQLAALFELGQHRPLPFMAQTSMAYFSAEVEDGLPIDTEHQ
LRLAEAESAWLDDAGFGDGQDPHNARLFRFPEDFGLTLDDSTHAGSAADFGLKAGEPKLN
ENELSENELNEDEFTLSNMSTGLPGGWQLRLKQSLSFPGLAQGILAPLISLYHKDKLAAL
ADFTQMGQEEYASTGAIEFTVERPAPD
NT seq
3684 nt
NT seq
+upstream
nt +downstream
nt
atgtttactcttatccagtccaacaagatggaattgctgtcggccaccctggcagaccgg
cttcgcgatggcgtgcccggcatgtcgccgcttagctgcgagcaaattctagtgcaaagc
cccggcatgtccacctggctccgccttgagctggcacgccacaatggcgtggcggcggcg
caggagtttccgctgccgtccagctttatctggcagctctgttatctgctgctcgatgac
gtgcccaaggaaaacccctttaccaaggcggcgatgacttggaaactgatggcgctgttg
ccctcccttctggatagagacaattttgcaccgctcagacattatctgggcgacgatgtc
gaacttaaactgtttcaactcagcggccgtatcgccgatattttcgatcaatatctggta
taccgtccggaatggatcctcggctgggagcaaaatgaatccccgctggagatagcgccg
cagcacgcctggcaacccgagctttggcgcgagttggtgcgttacaacaatcaggaattg
cagcagagccattaccacagggccaatctgcaccaagcgctgatagaaacgctgacaggc
ggcagcgatcatgccttggaagacctgccgcccagattattcgtgttcgggatctcctcg
atggcgccgcaaacactggatgtactctatgcgctcgccagtcgcatcgaagtagtgatg
ctgagcctcagcccctgtcgtcactattggggcgatatcatagagcccagggcgcgagcg
cgaatggcgctggcttttgagggcaaaaaacagttgcccgagctctgggaagacaagctg
gaagtgggcaatcccattctggccaataacggccgtctcggccgcgagctgctggatatg
gtgctggagctgccacctgagcggctggaactggaagagctgtttcaccccggcaacaca
gataccctgctcggcggcattcaaaatgacattctggagatggaaaccttaggcgaacct
ctggggccggatgtcagcaaatacctgaatatcgcccggcgcaggcccttggccgccacc
gacgactccatcacactgcgaagctgtcacagcccactgcgggaagtggaaaccttgcac
gatcatctgctgcatcgcctgcgcagcgacccttcgctggccgccaaagacatcatggtg
atgctgcccgatgtggccgcctacgccccctatatcgatgcggtgttttccgccaagagc
ggcgatcatttcatcccctatgccatagccgatcgcggcgcggcccaggaatccccctta
attgccggttttctcaacctgctggcgctggacaagagccgctttggcctgacagacatc
atcagtattctcgaagtacctgctgtgctggcccgctttggcatagcccaggaggagctg
gagcagctcaagggctggctcaaggccgccggtattcgctggggccgcgacagtcacaac
cgcgaagagctgggcttgcccgggtttgacaaacactcctgggcctttgggatccgccgc
atgctgctaggctatgccctgggtgatgatgccgagctgtatcagggcgatctgccgctg
gccggtattgaaggccagtcggcgcaagcgctcggcaagctgttgaattttattgaagcg
ctcgatgacttcagggaagagctcaagcagcaaacccctccggatgagcgggtggcgcag
cttaacgccctgctcgatgccttttatctggcccaggaagacgatgccagggaagagatc
aacgacattcgccaggccatagacagattcgccgaagagctgcgactgtcgggctttagc
ggggtattgccgctgacagtggtttggcaatggttcaactctaccttgagtgagtccagg
gtcggtcaacgttacctcgccggcagcgtcaacttctgtaccctgatgccgatgcgctcc
atccccttccgccaggtgtgtttgctgggaatgaacgatggcgtctaccccagggtgcaa
catcctgtggggttcgatctcaccgcccatgaaaagccaagacgcggcgaccgctctaga
cgcctggatgacagatacctgtttctcgaagccttgctgtcggcccgggatcagctctat
atcagttacataggccacagcgagcgcgataacagtgagcgtattccctccatgctggta
tcggaattgctggaatacattcagctgtgttaccgcccggacgaggcgcaatttacgccg
tcatcagtgcccacagatgccgatgagattgccgcccttggcgatctggcggccgatgcg
ctgatgcagcgcctcatcattcagcagccgctgcagcccttcgacgcccggctctacagt
gacagcgagctgcccggcagttttgcaacccagtggtgcccccgggagatgtttgccgcc
caaagcccggcgccctttattgaacatgagctgggcgaggaaaccggcctcaaggagccg
gagctggaactctcggcgctgatccgctttttccgcaacccggcgcagtatttctgccag
cgggtgctgcagctggacttgaggctggatatcgacagtcaggacaatgatgagcccttt
gagctcaacgccctgcaacgctatcagctgcagctgctgatgatgcaggatgcgctggaa
gacgagcgcggagagctggatgaaaccctgctcgacaagctcaaggccgaaggtctgctg
ccgatggcgccgtttgacgatctgctgctggatcaataccgccgcgatatcgccccggcg
gtggagcgcacccgttttcttcgcgccgaattgcccaagccggatgccattgaaatagcg
ctcaagcttgaggtcaatggccgcgagctgctgctctgtggccgtatcgaagactgctac
cccaagggcctggtcaacttaaggccgggtaccaccaagcccaaggatctgttgagcctc
tatattcgccatctgtgcctcaatgccagcggcattcacaggcacagctatctgctggat
gccggtcacttccacgccatggcgccgctcaaggccgagtccgccaaggccctgctgggt
cagttggccgccttgtttgaactggggcagcacaggccgctgccctttatggcgcaaacc
tccatggcgtacttcagcgccgaggtagaagatggcttgcccattgacactgaacatcag
ctgcggcttgctgaggccgagagcgcctggttggatgatgccgggttcggtgacggccag
gatccccataacgcccgcctgttccgctttccggaagactttggtttaacccttgatgac
agcacccatgctggctcggcggcggattttgggctcaaagctggcgaacctaagctgaat
gaaaatgagctgagtgaaaatgagttgaatgaagatgagtttaccctgagcaacatgagt
acggggttgccaggcggctggcaactcagactcaagcagagcctgagtttcccggggttg
gcccaggggattttggcgccgcttatcagcctttaccacaaagacaaactggccgccctg
gccgattttacccagatgggacaggaagaatatgcaagcactggagccattgagtttacc
gttgagcggccggcgcctgattga
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