Shewanella chilikensis: GII14_10950
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Entry
GII14_10950 CDS
T08813
Symbol
cmoB
Name
(GenBank) tRNA 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase CmoB
KO
K15257
tRNA (mo5U34)-methyltransferase [EC:2.1.1.-]
Organism
schk
Shewanella chilikensis
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
schk03016
]
GII14_10950 (cmoB)
Transfer RNA biogenesis [BR:
schk03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
GII14_10950 (cmoB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_9
Methyltransf_23
Methyltransf_25
Methyltransf_11
Methyltransf_31
Methyltransf_12
CMAS
PCMT
NpmA
PrmA
Motif
Other DBs
NCBI-ProteinID:
QIJ04615
UniProt:
A0A6G7LSJ9
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All DBs
Position
complement(2395856..2396824)
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AA seq
322 aa
AA seq
DB search
MISFSNFYQQIADSNLQHWLETLPAKLGDWQREHKHGALPKWEKVLAKLNYPAPDRLDFK
DSVTIGSGEQLATGQREKLENLLQLLHPWRKGPFHIHGIHIDTEWRSDWKWERVAPHISP
LAGRTVLDVGCGSGYHMWRMYGEGAKMVVGVDPSSLFLCQFEAVKRLAGGTPPVHLLPLG
IEELPPLDAFDTVFSMGVLYHRRSPIDHLLQLRDQLRTGGELILETLVIEGDENAVLLPR
DRYGKMNNVWFIPSVAALQLWLEKCDFREVRCVDVDVTSLAEQRSTPWMRNESLVDYLDP
TDINLTVEGYPAPKRATFIAIK
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
gtgatcagtttcagtaatttctatcaacagattgccgactccaatctgcagcattggctg
gaaacactgccggccaaactcggcgactggcagagagaacacaagcacggcgccctaccc
aagtgggaaaaagtgctcgccaagctcaactaccccgcccccgaccgactggatttcaaa
gacagtgtcaccataggctcaggtgagcaattggcaacagggcagcgggaaaaactggaa
aacctgctgcagttgctgcatccctggcgcaaggggccatttcatattcacggcattcat
atcgataccgaatggcgctctgattggaagtgggagcgcgtcgcgccccatatcagcccg
ctggcaggtagaaccgtgctggatgttggctgcggcagcggctatcacatgtggcgcatg
tatggtgaaggcgccaaaatggtggtcggtgtcgacccctcctcactatttttatgccag
ttcgaagcggtcaaacgcctcgccggcggcactccgccagtgcacctgctgcctttgggg
atagaagaactgccaccactggatgcctttgatactgtgttctccatgggagtgctctat
cacagacgttcccccattgatcacttgttgcaactacgtgaccaattgcgaaccggaggt
gaactcattttggagactttggtcatagaaggtgatgaaaatgccgtactgctgccacgg
gatagatatggaaagatgaataatgtatggtttatcccgtccgttgccgcgttgcaactc
tggcttgagaagtgcgattttcgtgaggttcgctgtgtcgacgtcgatgtaacatcactg
gccgagcaacgctccacgccctggatgcgcaacgaatctctggtggattacctcgatccg
accgacatcaatttaacagtggaaggttaccccgcccccaaacgggcaacctttatcgcg
attaagtaa
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