Shewanella chilikensis: GII14_11645
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Entry
GII14_11645 CDS
T08813
Symbol
gyrA
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
schk
Shewanella chilikensis
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schk03032
]
GII14_11645 (gyrA)
03400 DNA repair and recombination proteins [BR:
schk03400
]
GII14_11645 (gyrA)
Enzymes [BR:
schk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GII14_11645 (gyrA)
DNA replication proteins [BR:
schk03032
]
Prokaryotic type
DNA Topoisomerases
GII14_11645 (gyrA)
DNA repair and recombination proteins [BR:
schk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GII14_11645 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QIJ04740
UniProt:
A0A6G7LSL4
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All DBs
Position
complement(2536906..2539545)
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AA seq
879 aa
AA seq
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MTDLALSISPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNELKNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYTLVDGQGNFGSIDGDAAAAM
RYTEIRMEKLAHQLLADLEKETVDYVPNYDGTEMIPAVLPTRIPNLLVNGSSGIAVGMAT
NIPPHNLTEVVKGCLALIEEPELSIEQLMDYIPGPDFPTAAIINGKKGIEEAYRTGRGKA
IMRARAEVETEDNGRERIIVTEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDGM
RIVVEVKRGEVAEVVLNNLYAQTQMQTSFGINMVALTNGQPKLFNLKEMLEAFILHRREV
VTRRTVFELRKARERAHILEALAIALANIDPVIALIKASPTPAEAKVKLVETGWQLGNVQ
GMLEKAGDDAARPEWLEPEFGIRDGLYYLTEQQAQAILELRLHRLTGLEHEKILQEYEEL
LELIAGLLHILRSPERLMEVIKEELEEVLEQYGDERRTEINASAVDISLEDLICEEDVVV
TLSHLGYAKYQPLSDYQAQRRGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKLYW
LKVYQLPLASRQSRGKPIVNLLPLSEGEHITAILPVREYEADKYVIMATSHGTVKKTSLI
EYSRPRANGIIAVNLKDGDQLIGVDLTDGSNEIMLFSNEGKVVRFSEDQVRAMGRTATGV
RGIKLEDGQEVVSLIVPKEDGAILTVTENGFGKRTELSEYPTKSRATKGVVSIKVSERNG
AVVGAVQVGDNDEIMLISDKGTLVRTPAAGVSIIGRNTQGVTIIRTAGDEAVVGLQRIDE
IQSDEDEVEFDENGEPIVAEAAAEDTEGQAPEAPEAEQE
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgactgatctggctttatcaatttcgccaataaatattgaagacgaactaaagaactcc
tatctggattacgccatgagcgttatcgtcgggcgggcattgccagacgtacgcgatggc
ctcaagccggtacatcgccgcgtactctttgcgatgaacgagctgaaaaacgattggaat
aaaccctataagaagtcggcacgtgttgtcggtgacgtgataggtaagtatcaccctcat
ggtgacagcgccgtgtacgacaccatagtgcggatggcgcagcctttctcgctgcgttac
accctggtggatggccaaggtaacttcggctccatcgatggcgatgccgcggcggccatg
cgttataccgaaattcgtatggaaaagctggcgcatcaactgctggcagatcttgagaaa
gaaaccgtcgattatgtccccaactacgacggcaccgaaatgatcccggccgtgttgccg
acccggatccccaacctgctggtcaacggctcctccggtatcgccgtgggtatggccacc
aatattccgccgcacaacctgaccgaagtggttaaaggctgtttggcacttatcgaagaa
cctgagctgtctatcgaacagctgatggattatatcccgggcccggacttcccgacagcc
gccattatcaatggcaagaaaggcatagaggaagcgtaccgtaccggtcgcggcaaggcg
attatgcgcgcccgtgccgaggtggaaactgaagacaatggccgcgagcggatcattgtt
accgagatcccataccaggtgaacaaggctcgtctgattgaaaagattgccgagctggta
aaagacaagaaaattgaaggcatcagcggcctgcgcgacgagtctgataaagacggtatg
cgcatcgtcgttgaggtcaagcgcggcgaagtggccgaggtggtactcaacaacctctat
gcccagacccagatgcaaacctcttttggtatcaacatggtggccctgaccaatggtcag
cccaagttgttcaaccttaaggagatgctggaagcctttattctgcaccgccgtgaagtg
gtgactcgcagaaccgtgtttgaactgcgtaaggcccgtgaacgcgctcatatcctggaa
gccctggctatcgccctggctaacatcgaccctgtgattgcgctgatcaaggcctcgcca
acaccggccgaagccaaggtaaaactggtggaaaccggttggcagctcggcaacgtgcag
ggcatgttggaaaaagccggtgatgacgccgcccgtcccgagtggctggagccggagttt
ggtattcgcgatggcctctattatctgactgagcagcaagcccaggctatcctcgagcta
cgtctgcaccgtctgaccggtcttgagcacgagaagatcctccaggaatatgaagaactg
ttggagctgatcgctggattgctgcatatcctcagaagtccagagcgtctgatggaagtg
atcaaagaagagctggaagaagtgctcgagcagtatggcgatgagcgccgcaccgagatc
aacgcttctgccgtggatatcagcctcgaagatctgatctgcgaagaagatgtggtagtg
accctgtcgcacttgggctatgccaagtatcagccgctgagtgattaccaggcgcagcgc
cgcggtggtaagggcaaggccgccaccaaggtcaaagacgaagacttcgttgagaagcta
ttggttgccaatacccacgacactattttgtgtttctctgactttggcaaactctactgg
ctcaaggtctatcagttgccgctggccagtcgtcagtcgcgcggtaagcctatcgttaac
ctgctgccattgtccgaaggggagcacattacagcgattctgccggttcgtgaatacgaa
gccgacaagtatgtcatcatggccacttcccacggtaccgtgaagaagacatcgcttatc
gaatacagtcgccccagagccaacggcattatcgccgttaacctgaaagacggtgatcag
ttgattggcgttgacctgaccgacggcagcaatgaaatcatgctgttctccaacgaaggt
aaggttgttcgctttagcgaagatcaggtgcgcgccatgggccgtaccgctaccggtgtt
cgcggtatcaaactcgaagacggtcaggaagtggtttcactgatagtgccaaaagaagat
ggcgccattctgacagtgacagagaacggttttggtaagcgtaccgagttgagtgaatac
ccaaccaagagccgtgctaccaagggcgtggtttccatcaaggtcagcgaacgtaacggc
gccgtagtcggtgcggttcaggtcggcgacaatgatgaaataatgctgatcagcgacaag
ggcacactggtgagaaccccagcggccggtgtttccatcataggccgtaatacccagggc
gtgaccattatccgcactgccggtgacgaggccgtggtgggtttacaacgtatcgatgaa
atccagtctgatgaagacgaagtggaattcgatgaaaacggcgaacccatagtggccgaa
gctgcagccgaggatactgaaggccaagcgcccgaagcacctgaagccgagcaggaataa
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