Shewanella chilikensis: GII14_12010
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Entry
GII14_12010 CDS
T08813
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
schk
Shewanella chilikensis
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
schk01011
]
GII14_12010
Enzymes [BR:
schk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GII14_12010
Peptidoglycan biosynthesis and degradation proteins [BR:
schk01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GII14_12010
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
LysM_OapA
LysM1_NFP_LYK
HTH_26
Motif
Other DBs
NCBI-ProteinID:
QIJ04800
UniProt:
A0A6G7LSS8
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Position
2620539..2622140
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AA seq
533 aa
AA seq
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MCVCLSVQAIIRGLLFLKQIRFFILAGSLSLLGGCQLLSQAPESTAEAPVKATPAPIITQ
APQVISEPEVVVTDVWQRIRNQLNMSVPDEKLVRQYRQWYIDNPRHLEQISERAAPFMYL
IVEQIEERKLPMELALLPIVESAFDPFAYSHGAASGLWQFTSPMALHFGLEINWWYDGRR
DVPAATTAALNMMEYLYEKTGENWLYAIAAYNTGEGRVLNAVKRNRQKGQPTDFWSLSLP
KETERYVPQLLALADVIKNADKYGINLTPIANEQKLEVVDVGSQIDLALAARLAGMEVNE
LQQFNPGFNRWATAPEGPHKLVLPLDKAKEFEIALASTEPSERLNWLRYKIRKGDSLGMI
AKKHHTSIDVIRSVNGISGNNIVAGKHLLIPVALKDASAYPLSKEQRLGQNKSGKSKRSY
QVKSGDSLWQIAKDNGVSVNELVKWNGISAKTPLRPGKQLTIWTKASGQSQSANAVMRTV
KYKVRSGDSLARIASKFNVSVDDLLEWNQLKASKYLQPGQMLTLFVDVTRVKT
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgtttgcctgtctgttcaggccatcattcgaggattgctgtttttgaagcaaatc
agattttttatattggcggggagcctatccctgcttggcggctgtcagctgctatctcaa
gcgccggagtctactgccgaagcgccggttaaggccaccccggctccgatcattactcag
gctccacaagtcatcagcgagccggaagttgttgtcactgacgtgtggcagcggatccgc
aaccaactcaatatgtcggttcccgatgaaaagctggtgcgccaataccgtcaatggtac
atagataatccaagacacctggagcagatctccgagcgagccgctcccttcatgtatctg
attgtcgagcagatagaagagcgcaaactgccgatggagctggcactgctgccgatagtg
gaaagtgccttcgatcctttcgcctactcccatggtgccgcctcaggattatggcagttt
acctcgccaatggcgttgcattttggcctggagatcaactggtggtatgacggacgccgc
gacgttcccgcagctaccactgccgctctgaatatgatggaatacctttacgaaaaaacg
ggcgagaactggctctatgccattgccgcatataacactggcgaaggtcgggtgttgaac
gcggtcaagcgtaaccgtcaaaagggacaacctacagacttctggtccctgtcgctgccc
aaggaaaccgagcgttatgtgccgcaactgctggcactggccgatgtgatcaaaaacgcc
gacaaatacggcattaacctgacaccaattgccaacgagcagaaactggaagttgtcgat
gtcggcagccagatagatctggccctggcggcgcgtcttgccggcatggaggtcaatgag
ttgcaacagttcaacccaggttttaatcgctgggccactgcaccggaagggccacacaag
ctggtactgccgctggacaaagcgaaagagtttgaaattgccctggccagtacggaacca
agcgagcgcctcaactggctcagatacaagatccgcaagggtgactctcttggcatgata
gccaagaagcatcataccagtatcgatgttattcgttctgtcaatggcatcagtggcaac
aatattgtcgccggtaagcacctgttgatcccggtcgccctcaaggatgcatcggcctac
ccgctctccaaggagcaacgtctgggtcagaataagtccggcaagagcaaacgcagctac
caggtcaagtccggtgactccctgtggcagatagccaaggataacggcgtcagtgtcaat
gaactggtgaaatggaacgggatctccgccaagacgccgctgcgtcccggcaaacagctg
accatctggactaaagcctctgggcaatcccagagtgccaatgccgtaatgcgcacagtg
aaatacaaggttcgctccggtgattcgctggctcgaatcgccagcaagttcaatgtcagt
gtggatgatctgctggaatggaaccagctcaaggccagtaagtacctgcaacccggacag
atgttgaccctgttcgtggatgtgacccgcgtcaagacctga
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