KEGG   Shewanella chilikensis: GII14_12010
Entry
GII14_12010       CDS       T08813                                 
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
  KO
K08307  peptidoglycan lytic transglycosylase D [EC:4.2.2.29]
Organism
schk  Shewanella chilikensis
Brite
KEGG Orthology (KO) [BR:schk00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:schk01011]
    GII14_12010
Enzymes [BR:schk01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.29  peptidoglycan lytic transglycosylase
     GII14_12010
Peptidoglycan biosynthesis and degradation proteins [BR:schk01011]
 Peptidoglycan biosynthesis and degradation
  Lytic transglycosylase
   GII14_12010
SSDB
Motif
Pfam: LysM SLT LysM3_LYK4_5 LysM_RLK LysM_OapA LysM1_NFP_LYK HTH_26
Other DBs
NCBI-ProteinID: QIJ04800
UniProt: A0A6G7LSS8
LinkDB
Position
2620539..2622140
AA seq 533 aa
MCVCLSVQAIIRGLLFLKQIRFFILAGSLSLLGGCQLLSQAPESTAEAPVKATPAPIITQ
APQVISEPEVVVTDVWQRIRNQLNMSVPDEKLVRQYRQWYIDNPRHLEQISERAAPFMYL
IVEQIEERKLPMELALLPIVESAFDPFAYSHGAASGLWQFTSPMALHFGLEINWWYDGRR
DVPAATTAALNMMEYLYEKTGENWLYAIAAYNTGEGRVLNAVKRNRQKGQPTDFWSLSLP
KETERYVPQLLALADVIKNADKYGINLTPIANEQKLEVVDVGSQIDLALAARLAGMEVNE
LQQFNPGFNRWATAPEGPHKLVLPLDKAKEFEIALASTEPSERLNWLRYKIRKGDSLGMI
AKKHHTSIDVIRSVNGISGNNIVAGKHLLIPVALKDASAYPLSKEQRLGQNKSGKSKRSY
QVKSGDSLWQIAKDNGVSVNELVKWNGISAKTPLRPGKQLTIWTKASGQSQSANAVMRTV
KYKVRSGDSLARIASKFNVSVDDLLEWNQLKASKYLQPGQMLTLFVDVTRVKT
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgtgcgtttgcctgtctgttcaggccatcattcgaggattgctgtttttgaagcaaatc
agattttttatattggcggggagcctatccctgcttggcggctgtcagctgctatctcaa
gcgccggagtctactgccgaagcgccggttaaggccaccccggctccgatcattactcag
gctccacaagtcatcagcgagccggaagttgttgtcactgacgtgtggcagcggatccgc
aaccaactcaatatgtcggttcccgatgaaaagctggtgcgccaataccgtcaatggtac
atagataatccaagacacctggagcagatctccgagcgagccgctcccttcatgtatctg
attgtcgagcagatagaagagcgcaaactgccgatggagctggcactgctgccgatagtg
gaaagtgccttcgatcctttcgcctactcccatggtgccgcctcaggattatggcagttt
acctcgccaatggcgttgcattttggcctggagatcaactggtggtatgacggacgccgc
gacgttcccgcagctaccactgccgctctgaatatgatggaatacctttacgaaaaaacg
ggcgagaactggctctatgccattgccgcatataacactggcgaaggtcgggtgttgaac
gcggtcaagcgtaaccgtcaaaagggacaacctacagacttctggtccctgtcgctgccc
aaggaaaccgagcgttatgtgccgcaactgctggcactggccgatgtgatcaaaaacgcc
gacaaatacggcattaacctgacaccaattgccaacgagcagaaactggaagttgtcgat
gtcggcagccagatagatctggccctggcggcgcgtcttgccggcatggaggtcaatgag
ttgcaacagttcaacccaggttttaatcgctgggccactgcaccggaagggccacacaag
ctggtactgccgctggacaaagcgaaagagtttgaaattgccctggccagtacggaacca
agcgagcgcctcaactggctcagatacaagatccgcaagggtgactctcttggcatgata
gccaagaagcatcataccagtatcgatgttattcgttctgtcaatggcatcagtggcaac
aatattgtcgccggtaagcacctgttgatcccggtcgccctcaaggatgcatcggcctac
ccgctctccaaggagcaacgtctgggtcagaataagtccggcaagagcaaacgcagctac
caggtcaagtccggtgactccctgtggcagatagccaaggataacggcgtcagtgtcaat
gaactggtgaaatggaacgggatctccgccaagacgccgctgcgtcccggcaaacagctg
accatctggactaaagcctctgggcaatcccagagtgccaatgccgtaatgcgcacagtg
aaatacaaggttcgctccggtgattcgctggctcgaatcgccagcaagttcaatgtcagt
gtggatgatctgctggaatggaaccagctcaaggccagtaagtacctgcaacccggacag
atgttgaccctgttcgtggatgtgacccgcgtcaagacctga

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