Shewanella chilikensis: GII14_14385
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Entry
GII14_14385 CDS
T08813
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
schk
Shewanella chilikensis
Pathway
schk03030
DNA replication
schk03430
Mismatch repair
schk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GII14_14385
03430 Mismatch repair
GII14_14385
03440 Homologous recombination
GII14_14385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schk03032
]
GII14_14385
03400 DNA repair and recombination proteins [BR:
schk03400
]
GII14_14385
Enzymes [BR:
schk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GII14_14385
DNA replication proteins [BR:
schk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GII14_14385
DNA repair and recombination proteins [BR:
schk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GII14_14385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
DNAX_ATPase_lid
AAA
AAA_22
AAA_5
RuvB_N
AAA_16
AAA_14
ResIII
AAA_2
PIF1
AAA_18
TsaE
AAA_assoc_2
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QIJ05214
UniProt:
A0A6G7LU06
LinkDB
All DBs
Position
complement(3160770..3163685)
Genome browser
AA seq
971 aa
AA seq
DB search
MSYQVLARKWRPASFDQVVGQSHVLHALTNALSQQRLHHAYLFTGTRGVGKTSLARLFAK
GLNCETGITAKPCGQCSACQEIAQGRFVDLIEVDAASRTKVDDTRELLDNVQYRPTRGRF
KVYLIDEVHMLSRSSFNALLKTLEEPPEHVKFLLATTDPQKLPVTVLSRCLQFNLKSLDQ
TEMAGQLQHILQSEGLKFETSALTLLARAANGSMRDALSLTDQAIAFGAGQVMLEQVQTM
LGAIDERQVLALFDALLTGDIAKMMQEVAKVLAFGADAAEVLRSLLELLHQITLSQFAPA
AANLSLFGPQITHYAENLAPEQVQLYYQLLLSGRKELPYAPDPKSGLEMALLRAVAFVPE
TPPKRWQRGEVADLSALDNSHSAAAVARAPNQEVASSNVDEIKPQAVSAQSVISQAVEAQ
AEKIQAAKMPTQVSSAAETQASSGGAQMAAGEGEDADEQALLAEQALLLSQASSMGFRNK
ASVPLQASPSQMNASKTSVAEANATVESVKVTESLPVEQTAAAQPHKPVSQAETSVVSDE
QQSQDDFYAAMGYSQQGEGQESSLDFYQQQMSMDGQMPSAADNSTSEVSLSNKPSSEPSV
PADANIESGSDDILADDLLDQVLATRDLLLSDIEAASPKDGEEKKPLLERRSAAAAPESD
AAAASQSEALAEPGNSPELSKSPELSKSPELSKSPERFNSPEASRAETQTPVAGKMAFGS
GPSHVAALKEDSPPWEDAPEGTVAAGREAVEDSETLQNAAFPQAEPESVPEFLPEPEPKP
QNTAQQTAQEAAPQVIDEPGHELKNELGLGSGQSATVNTVNTGALPSGHPQDLYWYKLMS
ALEIGGRVRQLAVNSVCERIAEPLPLLLKPDQKHLAADSAIKQLEEALSKLFGKPCRTEI
VVGVDDQRETPLEIRHRFHQELLSGAHASLMNDENIQWLVSHMGAELDQDTLGYPPELLS
QRANLIADKAP
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaggtactagccagaaaatggcgacctgccagttttgatcaggtagtcggc
caatctcatgtcttgcatgcattgaccaatgccctgagtcagcaacgactgcaccatgcc
tacttatttaccggtacccgcggcgtcggcaagaccagtttggcgcgcctgttcgccaaa
gggctcaactgtgaaaccgggatcaccgctaagccatgtggccaatgcagcgcctgtcag
gaaattgcccaggggcgatttgtcgaccttatcgaagtcgatgccgcttcccgtaccaag
gtagatgatacccgtgaactgctggataatgttcagtatcgcccgacccgggggcgtttc
aaggtttacctgatagacgaagtgcacatgctgtcccgcagcagtttcaatgcgctgctc
aagactctggaagaaccccctgagcacgtcaaattcctgctggccactacagatccgcaa
aagctgccggtgactgtactgtcccgctgcctgcaatttaacctaaagagcctggatcag
accgagatggccggtcagctgcagcatattttgcaaagcgaaggcctcaagtttgaaacc
tctgcactgacgcttctggcgcgagccgccaatggcagtatgcgtgatgccctgagtttg
acagatcaggccatcgcctttggggctgggcaagtgatgctggagcaggtacaaaccatg
ctcggcgccatagatgagcgccaggtgctggcgctgtttgatgcgctcctcacaggtgat
atcgccaaaatgatgcaggaggtggccaaggtgctggcatttggcgccgatgctgccgaa
gtgctgcgtagcctgctggagctcttgcatcagataaccctgagccagtttgcgccggcg
gcggctaatctgtcgctgtttggtcctcaaattacccattatgctgaaaacctcgccccc
gagcaggtgcagctctattaccagttgctgctcagtggtcgcaaggagctgccttatgca
ccggatcccaagtcaggattggagatggcgttactcagagccgttgcctttgtgccggaa
acgccgcccaagcgctggcaaaggggcgaagtcgccgatctatctgccttggataacagc
catagtgcagctgcagttgcaagggcgccgaatcaagaagtggcaagcagtaacgtcgat
gagataaagcctcaagccgtctctgctcaatctgttataagtcaggctgtcgaagcgcaa
gctgaaaagatacaagctgccaagatgccaacacaggtaagctcggcggctgagacgcag
gcgagcagtggtggcgcgcagatggctgccggtgaaggcgaagatgcagatgaacaggcc
ttattagccgaacaagcgctgctgttatcccaagccagtagcatggggtttcggaataag
gcctcagtgcctttgcaagcttccccttcacagatgaatgcgtcaaaaacaagtgtggct
gaagcaaatgcgacagttgagtcagttaaagtgaccgagtctctgcctgtagagcaaacg
gctgcagctcagcctcacaagcctgtttcacaagctgaaacctcggttgttagcgatgag
cagcagtcccaggatgatttttacgctgccatgggctattcacaacaaggtgaagggcag
gagagtagcctggatttttatcagcagcagatgtcgatggacggccaaatgccatccgct
gctgacaatagtacttccgaggtatcgctatcaaataagccatcgagcgagccatctgtg
cctgccgatgccaacatagaatctggcagcgatgacatcttggctgatgatctgctcgat
caggtacttgccacccgggatttgctgctcagtgatatagaggcggccagccccaaggac
ggtgaagaaaaaaagcctttgctggagcgtcgcagcgcggccgcagcacctgagtccgat
gctgcagcggccagtcagtctgaagcgttggcagagccaggaaacagccctgagctgagc
aaaagccctgagctgagcaaaagccctgagttgagcaaaagccctgagcggttcaatagt
cctgaggcctcccgagcagaaacgcaaactcctgtcgccgggaaaatggcttttggatct
ggccctagtcatgttgcggcgctcaaggaagacagcccgccatgggaagatgccccagag
ggtacggttgcagcgggtcgcgaggcggtggaagacagtgaaacgcttcaaaatgcggct
ttcccacaagccgaaccagagtctgtgcctgagtttttgcctgagcctgaaccaaaacca
caaaataccgcgcaacagacagcacaggaagctgcaccacaggtgatagatgagccggga
catgagctgaaaaatgagcttgggctggggtctggccaaagcgctacagtaaatactgta
aacacaggggctctacccagcggccatccacaggatctttattggtataaattgatgtcc
gcgctggaaataggcggccgggtaaggcaactggcggtgaactcagtctgtgagcggata
gctgaaccgctgcccttgctgcttaagccggatcagaagcacttggcggcagattcggcc
atcaaacagctcgaagaggcgctttccaaattgtttgggaaaccttgccgcacagagatt
gtcgtaggagtagatgaccaaagggaaacgccgttggaaattcgtcatcgttttcatcag
gagctcctgagcggggctcatgcttcattgatgaatgatgaaaatattcaatggcttgtc
agtcatatgggggccgaactggatcaggatactctcggctatccccctgagctgctcagt
caaagggctaatttgatcgcagacaaggcgccctag
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