Shewanella chilikensis: GII14_14655
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Entry
GII14_14655 CDS
T08813
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
schk
Shewanella chilikensis
Pathway
schk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GII14_14655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schk03000
]
GII14_14655
03400 DNA repair and recombination proteins [BR:
schk03400
]
GII14_14655
Enzymes [BR:
schk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
GII14_14655
Transcription factors [BR:
schk03000
]
Prokaryotic type
Helix-turn-helix
AraC family
GII14_14655
DNA repair and recombination proteins [BR:
schk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GII14_14655
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QIJ05264
UniProt:
A0A6G7LU56
LinkDB
All DBs
Position
complement(3211866..3213434)
Genome browser
AA seq
522 aa
AA seq
DB search
MMTIFTELSTDTCRRARLSRDPRFDGRFFIGVKTTGIYCRPICPAVAPKEENVEYFFSAA
AAANQGLRPCLRCRPESAPGSCAWKGTRTTLERAVTLIEQGALSGESAKGVEHLAQRLGI
SSRYLRKLFVEALGLSPKQYATFQQLMFAKQLLHQTRLPITQVALAAGYTSIRRFNEVFQ
SQLQLTPSALRRSADTQMDDSNRMQLFLSYRPPYAWQALLDFYRLRAVTGMEWFELNGRQ
GYGRSLLLNSDKGGFKAWFFAELQASQNRVAVTLALEEGAELSLLPVLVNRIRRILDLDA
DMQQVEQVLQPITLADSTFGWEPGLRLPAAGSLFEAGVRAVLGQQVSVTQATKLLGQLVA
ARGERRVIAGREISFFPEPESMLAADFDELKMPASRKTALAELARFQLEHGDTEPEAWLS
LKGIGPWTIAYARMRGLSDPDVLLGGDLIIRKRLLTLLGETAISTEVNGNLAQINPDLAT
QGAVAQHKGKKSAAHYQALLQGVTEAASPWGSYLTLQLWQSA
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgatgacgatttttaccgagctcagcaccgacacctgtcgccgggcgagacttagccgc
gatcccaggtttgatggccgcttctttatcggggtgaagacgacgggtatctattgccgg
cctatctgtccggcagtggcgccaaaagaggaaaatgtcgaatactttttctcggccgcc
gccgcggcaaatcaaggtttgcgcccctgtttgcgttgtcgtccggaaagtgccccaggc
tcctgtgcttggaaaggcacgagaaccacgctggagcgggcagtaaccctgatagagcag
ggcgccttgagcggcgagtcggcgaaaggtgtcgagcacttggcacagcgcctcgggatc
agcagtcgttatctgcgcaagctgtttgtcgaagcgttgggcctgtctcccaagcaatac
gctacgtttcagcagttgatgtttgccaagcagctgctgcaccaaacccggctccctatc
acgcaggtggctttggctgcgggatacacgagcattcgccgcttcaacgaagtgtttcag
agtcagctgcagcttaccccgtcggcgctcagacgcagcgctgatacgcaaatggacgac
agtaacaggatgcaactgtttttgagttaccggccgccatatgcctggcaagcgttgctt
gatttctatcgcctgcgggcggtaacaggaatggagtggtttgaacttaatggccgtcag
ggctatggtcgcagcctgttactcaacagcgacaaaggcgggttcaaagcttggtttttt
gccgagttgcaggcctcgcaaaatagagtcgcagttaccctggcattggaagagggcgcc
gagcttagcttgttgccggtattggtcaatcggataagaaggatattggatctcgacgct
gatatgcagcaggttgagcaagtgttgcaacctatcacactggcagactccacctttggt
tgggagccggggctgaggctaccggcagcaggctctctgtttgaagccggtgtgcgggct
gttctgggccagcaggtcagcgttacccaagccacaaaactgttggggcagttggtggca
gccagaggtgagaggcgagttatcgccgggcgggaaattagcttctttcccgagcccgaa
agcatgttggcggcggactttgacgagttgaaaatgcccgcaagcagaaagacggcattg
gctgagttggcgcgttttcagcttgagcatggtgataccgagcccgaggcttggctcagt
ttgaaagggattggcccttggaccatagcctacgccagaatgcgcgggttgtcggatcct
gatgtgttgctcggcggcgacttgataatccgtaagcgtctgctcacgctgcttggtgaa
acggcaatctcgaccgaggttaacgggaacttggctcaaattaacccggatttggctaca
caaggtgcagttgctcagcacaaaggcaagaaaagtgcggcccattaccaagcgttactg
caaggtgttactgaagccgcgtcgccctggggcagttatcttactctgcaactttggcag
tcggcatag
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