Shewanella chilikensis: GII14_15990
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Entry
GII14_15990 CDS
T08813
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
schk
Shewanella chilikensis
Pathway
schk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GII14_15990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schk03400
]
GII14_15990
Enzymes [BR:
schk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GII14_15990
DNA repair and recombination proteins [BR:
schk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GII14_15990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QIJ05493
UniProt:
A0A6G7LUJ8
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All DBs
Position
3522408..3523262
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AA seq
284 aa
AA seq
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MTSQERWVGAHVSAQGGVENAPLNAHKIGASAFALFTKNQRRWQAAALTEQSIAAFQENC
QQLGFRPEAILPHDSYLINLGHPDPLLLEKSRDAFVDEMLRCKQLGLTLLNFHPGSHLRQ
ISENHCLRNISDSINLALAACDGVCAVIENTAGQGSNLGHSFEQLAQIIDGVEDKSRVGV
CLDTAHMFAAGYDIRTQESCRESFDAFGHIVGFQYLKGMHLNDSKTGLGSRVDRHDSLGM
GEIGKTAFEYILGHPATKRIPLILETIRPEIWPEEIAWLKSLSR
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
gtgacgagtcaggaaaggtgggttggtgcccatgtcagcgcccagggtggcgtggaaaat
gctccccttaatgcccacaagataggggccagtgcctttgcactgtttaccaaaaatcaa
cggcgctggcaggcagcagctttaaccgaacagtccatcgccgcctttcaggaaaactgc
caacagctggggttcagacccgaggcaattctgccccacgacagctatctgattaacttg
ggacacccggatcccttgctgctggaaaaatcccgcgatgcctttgtcgatgagatgctt
cgctgcaaacaattgggattaaccttgctaaactttcatcccggcagccacttgcgacag
ataagtgaaaaccactgtctgcgtaacatcagcgattcaatcaacctggcattggcagct
tgtgatggcgtctgtgccgtcatcgaaaataccgcgggccaaggctccaacctgggacac
agctttgaacaactggcgcagatcatagacggggttgaggataaatcccgagtcggcgtt
tgcctggataccgcccatatgtttgccgcaggttacgacatccgtactcaggaaagctgc
cgggaaagctttgatgcctttggccatatcgtgggctttcaatacctcaagggcatgcac
ctcaacgacagcaagacagggctcggcagtcgggtcgaccgccacgactccttaggtatg
ggcgaaataggcaaaaccgctttcgagtatattctcggccaccccgccaccaagaggata
cctttgatattagaaaccatacgcccagagatctggcccgaagaaattgcctggcttaaa
agcctcagccgctga
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