Shewanella chilikensis: GII14_16660
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Entry
GII14_16660 CDS
T08813
Symbol
phrB
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
schk
Shewanella chilikensis
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schk03400
]
GII14_16660 (phrB)
Enzymes [BR:
schk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GII14_16660 (phrB)
DNA repair and recombination proteins [BR:
schk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GII14_16660 (phrB)
Prokaryotic type
GII14_16660 (phrB)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QIJ05613
UniProt:
A0A6G7LUW7
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All DBs
Position
complement(3648642..3650141)
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AA seq
499 aa
AA seq
DB search
MSQSLPNHVPSSEKACVAIWFRSDLRTSDNQALWLACEAARAQGLPLRGFYIATPAQWQQ
HSVGPMQLDFIERSVNQLQRALASLGIAFDLLHCDDFSLVNATVEKYCQRQGVKQIFAGR
EVEINEQRRDQALAQLTRTIGVGLQFTDEHCLLPPGSVCTQGGEMYRVFTPFFRRWRELL
GREAITPLPVPAPLAPALPEPAELSFKVSKQDSKQDSHHWPVGEGAARQRLDSFIANQLA
DYGQERDFPALDGTSCLSPYLAFGILSPRQCVAALLNRFPEAMAEDNSPGRSWLAELAWR
EFYRHLLHAWPQLCMGRNFNALGDDIVWRNDPQEFAAWCEGRTGYPLVDAAMRQLNQTGW
MHNRLRMVTASFLTKHLLVDWRWGEQYFRRALIDGDLAANNGGWQWSAGTGCDAQPYFRI
FNPMSQSEKFDPDASFIRRYLPELAHWPLKQIHHPGTAASSRFTEPSLFATAAYPPPIVE
HSAARQRALTALAVLKKSA
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtccttgcccaatcatgtgccttccagtgaaaaggcctgtgttgccatctgg
tttcgcagcgatctgcgcacatcagataaccaggccctgtggctggcgtgcgaagcggca
agggcccaaggtctgccgctgcggggtttttatattgcgactccggcccagtggcagcag
cactctgttggtcccatgcagctggatttcattgagcgcagcgtcaatcaactgcaacgg
gcgttggcatctttggggatagcttttgatttactgcactgtgatgatttctctttggtg
aatgccacagtcgagaagtattgccaacgccagggcgttaagcagatttttgccgggcgc
gaggtggagattaacgagcagcgccgggatcaggcgctggcgcagcttactaggactata
ggggtaggcctgcagtttaccgatgagcactgtttgctgccgccagggagcgtttgtacc
caaggcggcgaaatgtatcgggtatttacccccttctttcgccgttggcgtgagctgctg
ggaagagaggcgataacgccgctgccggtacctgcgcctctggccccggctttacccgaa
cccgcagagctgagttttaaggtcagcaaacaagacagtaaacaagacagccatcactgg
ccagtgggtgaaggggcggccaggcagcggctcgatagttttattgccaaccagcttgcc
gattacggccaggagcgggatttcccggcgctcgatggcaccagttgcctgtcgccctat
ctggcgtttggtattctcagcccacggcaatgcgtggcggcgctgctcaatcgcttcccc
gaagctatggcagaggacaatagtccgggtcgcagctggctggctgagctggcctggcgc
gagttttaccgccatctgctgcatgcctggccccagctgtgtatgggccgcaacttcaac
gcgctcggcgatgacatagtctggcggaacgacccgcaagagtttgccgcctggtgcgag
ggccgcaccggttatccgctggtggatgccgccatgcgtcagctaaaccaaaccggctgg
atgcacaatcggctgcgaatggtgaccgccagcttcctcaccaaacacctgttggtggac
tggcgctggggcgagcagtattttcgccgcgccctgatagatggtgacctggcggccaat
aacggcggctggcagtggtctgccggcaccggctgtgatgcccagccctatttcaggatc
ttcaaccccatgagccagagcgaaaagttcgaccctgacgccagttttatccgccgttat
ctgcctgaactggcgcactggccgcttaaacagatacaccatccgggcacagccgcatcg
tcccgcttcaccgagccgagtctgtttgccactgcggcttatccaccacctatagtcgag
cacagcgcggcgcggcaaagggcgttgaccgccttggccgtgctgaaaaagtctgcctga
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