Shewanella chilikensis: GII14_17145
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Entry
GII14_17145 CDS
T08813
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
schk
Shewanella chilikensis
Pathway
schk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GII14_17145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schk03400
]
GII14_17145
Enzymes [BR:
schk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
GII14_17145
DNA repair and recombination proteins [BR:
schk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GII14_17145
Prokaryotic type
GII14_17145
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QIJ05703
LinkDB
All DBs
Position
complement(3747138..3747806)
Genome browser
AA seq
222 aa
AA seq
DB search
MALSADWQAFIAAEQQAPYFQQLCEFVAAERAAGKAIFPSEKEVFSAFELTPLDKVRVVL
IGQDPYHGPGQAHGLCFSVKPGVKTPPSLVNMYKELATDIPGFVIPDHGYLVNWAKQGVL
MLNTVLTVEQGKAHSHAKAGWETFTDRALQLLDQRDEPIIFVLWGSHAIKKGKLIKAPQH
KILSGPHPSPLSAYRGFFGCGHFSAINQQLKQWQQAEIDWQV
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atggcgctttccgctgactggcaggcatttatcgccgctgaacaacaggccccttatttt
cagcaactctgtgagtttgtcgccgcagagcgcgccgccggcaaggccatctttccatcc
gagaaagaggtgttcagcgcctttgagctgacaccgctggataaggtgagagtggtgctt
atcggtcaggacccttaccatggtccagggcaagcccatggcctgtgtttctcggtcaaa
cccggggtgaagacaccgccttcgctggtcaatatgtacaaggaattggcgactgacatc
ccaggattcgtaatcccggatcacggctatcttgtgaactgggccaagcaaggggtcttg
atgctcaacactgtgctgacggtggagcagggcaaggcgcactcccatgccaaagcgggc
tgggaaaccttcaccgacagggctctgcagctgctggatcagcgtgacgagccgattatt
tttgtgctctggggcagtcatgccattaagaaaggcaagcttatcaaggcgccgcagcac
aagatcttaagcggcccgcatccttcgcctctatcagcctaccggggtttctttggttgt
ggtcatttctcggccatcaatcagcaactcaagcagtggcagcaagcggaaatagactgg
caggtgtag
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