Shewanella chilikensis: GII14_17895
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Entry
GII14_17895 CDS
T08813
Name
(GenBank) PAS domain S-box protein
Organism
schk
Shewanella chilikensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Response_reg
PAS_3
PAS_9
MCP-like_PDC_1
PAS
HATPase_c
HisKA
PAS_4
PAS_8
Hpt
dCache_1
PDE8A_N
PAS_11
HAMP
Diguanyl_cycl_sensor
PAS_7
MPH2
Motif
Other DBs
NCBI-ProteinID:
QIJ05836
UniProt:
A0A6G7LVJ9
LinkDB
All DBs
Position
complement(3915256..3920550)
Genome browser
AA seq
1764 aa
AA seq
DB search
MPDSKTLRTFRSRILFQIAVPLIIIMTVISGITGWYNYQDEEKAFFTDLAEKADFAAKRL
EFELSLAQRNTQTLAYSLGHLESFERLQQADNLYQLLKDRLQRNPNFYGSAIAFQPGFLP
GQKRFAPYAFRQDLSIAIMDIGQEAYDYTSGEWGWWTEALKHPDGYWAPPYFDEGAGNAL
MITFSQPFGSEAAPLGVITTDLALSSLPIRLGIDPKKLLVLDNQGRLIYHPDNNLSRNAK
LEDWLVNTAAGKEAAQHIYAADTPEVALSDLNGVQYLASVARVAPLEWRVLVITPQKQLL
RAFLQDFSSLTINLLLLAILLLVTSYWSAKRLTQPLEQLEAGIVDFSKGLIKRLQKPEGV
VREIATLSNKFNEMAEILEEREQALLDSRGNRFAKLIDGMSDKSFYCSMDPYGAIVQASD
GVEKVLGISPEVLRRKYQRLFSSNSINEANWQYMEQALAGESVPPHQVELADAEGGLRRL
DLFMQPLLDEEGKLISVEMLFNDVTEQFSAAAWSNAVLEAAPEAMLIVDENGMLVFSNSR
CQELFGYNAEEMLKLNIDQLLPEVDRLQHAAKRHTFVTDGKDRMMAKGKALQALKCNGSQ
FPVQIGLSLLPADHKGKRQVAASIRDLTEQLAVERKIRESESRFRGLVSNIPGAVYRTRV
DEQWTMEYVSDNITEISGYPAWHFIDSKKRSYGSLVIDEDKQLCIDTINSALAEQQAFDV
EYRIRHRDGSVRWIHEKGKASYDEDGNPLWFDGSLNDITDSKLAQEKMEQSREQLETITE
SVPSTVYQLFWQGPQQRRFTFLSSAAIATLGHHKNEVMADFELVAERIVTEDRDSIIRLL
SGEGGLQWIKEFRYRHPSGEVRWLEAGAKGSKQQDGMLWNGYLTDISGRKKMETELAQSE
AHFRALFDNAGIGIVNLDDRGTIMDCNGQFCSDMGMSAEQLKRRSFAELMLPEDRSKVSE
LYECLQQSDDHSVSGEWRLLSASGEPMWMAVNASEIEEEGDRERSVVMSIANITRLKLLS
NELMTAKDEADAANKAKSDFLANMSHEIRTPMNAIIGMSQLCLQTKLDNKQRNYVEKIER
ASQSLLGIINDILDFSKIEAGKLDIEVVPFQLDSILEDLGDMFSERAADKQLELLFAVAP
GVPSYLEGDPLRLSQVLINLMNNAIKFTERGEVMLSITELSREQDEVILRFAVRDSGIGL
TAEQQARLFKSFSQADTSTTRKYGGTGLGLAISKQLVELMEGEIGVESQFGNGSCFFFTV
RLKVAENDKLNVEQELEGMPILVVDDNGTARDILRTTLESMGFAVDCARSGMEALDKVKR
KPYKMALIDWKMPEMDGMETARQILQLKEPPLILMVSAHANSDFIEQLEQLGINGYITKP
VSASRLLDGIMLALGRQGHIPVRRKVLDLESLQLAALVGKRVLLVEDNEMNQEVATEFLE
QVGIDLSIAENGQIALEKLAQQQFDLVLMDCQMPVMDGYQATEALRKMPGLEQLPVVAMT
ANAMAGDKEMCLRAGMNDHIAKPIEVSLLYQVLLQYLGGGQAPVAGNNNTGMADGDDSED
LVSWPEQESLDIDRGLQLVQHSERLYRRILERFLGSQGNVGKRIRKALKEQQQEEAVRVA
HTLKGLAGNLCSEPLVEEARQLEAKLAAGEECEQELQAVEKRVAVIVDAIADWMGDKPQS
ASQTEADAAEEMDTETLKTALEQLQSSLEDADAEAVVQLEALSRRVSKPLWQRLKPVSSM
VGSYQFDDAADLVRELQQELNETE
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgccggatagcaagacactcaggacttttcgcagccgcattctgtttcaaatagctgtt
cccttgatcattatcatgactgtgatctcagggatcaccggctggtataactatcaggat
gaagaaaaggccttctttaccgatctggccgaaaaagccgactttgctgccaagcggctc
gaatttgaattgtctctggcgcagcgcaatacccaaactctggcctacagcctggggcat
cttgagtcattcgagcgtctgcagcaagctgacaatctttatcaactgcttaaagacaga
ttgcagcgcaaccccaacttttacggcagcgccatcgcctttcagcccggatttctgccc
gggcaaaaacgcttcgcgccctatgcttttcgccaggatctttctattgcgattatggac
ataggtcaggaagcctatgattacaccagcggcgaatggggatggtggaccgaggcgctt
aagcatcctgacggttattgggctcctccttatttcgacgagggggccggcaatgccttg
atgatcaccttctcacagccttttggcagtgaagctgcacctttgggagtcataaccaca
gatctggcgctttctagcttgccgattcgcttgggaatcgatcccaaaaagctgttggtg
ttggataaccaggggcggctcatctatcacccggacaataatcttagccgcaatgccaaa
ttggaagattggctcgtcaataccgccgctggaaaggaagcggcacaacatatctacgcc
gccgacactcctgaagtagcactgagtgacctcaatggtgtgcagtaccttgccagtgtt
gccagagtggcgccactggaatggcgggtgttggtgattaccccacaaaaacagttgtta
cgcgctttccttcaggatttcagctcgttaacaatcaacctgttgttgttggccatattg
ttgctggtgaccagttactggagtgccaagcgtctcacccagcccctggagcagttggaa
gccgggatagtggatttcagcaagggattgataaaacgtttacaaaagcctgaaggcgta
gtgcgggaaattgcgactctcagcaataaattcaatgagatggctgaaatcctcgaggag
agagaacaggcactgctcgactcccgaggcaacagatttgccaagcttatcgacggcatg
agtgacaagtccttctattgctctatggatccttacggtgcgatagtgcaggccagcgat
ggggtggagaaggtgttgggcatctccccagaggtgctcaggcgcaagtatcaacggctc
ttttccagcaacagcatcaacgaagcaaattggcagtatatggaacaggcgctggccggc
gagtctgtgccgccgcatcaggtggagttggccgatgccgaaggtgggctgagacgtttg
gatctgtttatgcagcccttactcgatgaggaaggcaagttgatttcggtggagatgctg
ttcaacgatgttaccgagcagttttccgccgcggcctggtccaacgcagtgctggaagcg
gcgccagaggcgatgctgattgtcgatgaaaatggcatgctggtgttctccaacagccgt
tgtcaggagctgttcggctataacgccgaggagatgctcaagctcaacatagatcaattg
ttgccggaagtggatcgtttgcagcatgcggccaagcgtcatacctttgtgactgacggt
aaggatcgcatgatggccaagggcaaggcgctgcaggcactcaagtgtaatggctcccag
tttccggtgcagataggtttgagcctgttaccggccgatcataagggcaaacgccaggta
gcagcatcgattcgggatctgactgagcaactggcggtagagcgtaaaattcgcgagagc
gagagccgttttcgcggtctggtatccaatatccccggcgccgtttatcgtacccgggtc
gatgaacagtggaccatggagtatgtcagcgacaatatcacagagataagcggttatccg
gcctggcatttcatcgacagcaagaagcgcagttatggctccctggtcatagatgaagac
aagcagctgtgtattgacaccataaactcggctctggccgagcagcaagcctttgatgtt
gagtatcgcattcgccaccgggatggcagcgtgcgttggatccatgaaaagggtaaggcc
agttacgacgaagatgggaatcctctctggttcgatggtagcctcaacgacattaccgac
agcaaactggctcaggaaaagatggagcagtcgcgggagcaactggaaaccatcactgag
tctgtgcccagtactgtgtatcaactgttttggcaaggcccgcagcaacgcagattcacc
ttcctttccagtgcagccattgccactttgggccaccacaagaatgaggtaatggccgat
tttgaactggtggccgagcggatcgttactgaagatagagacagtattattcggctgctt
tccggtgaaggggggctgcagtggatcaaagagtttcgctaccgtcatccttccggcgag
gtgcgttggcttgaggccggtgccaaaggcagtaaacagcaggatggcatgctttggaac
ggttatctgaccgatatcagcggccgtaaaaagatggaaaccgagctggctcagagtgag
gcccatttccgcgccctgtttgataacgcaggcataggcatagtcaatctggatgatcgc
ggcaccataatggattgtaacggccaattctgcagtgatatgggaatgagcgccgaacag
cttaaacgtcgctcgtttgccgaactgatgctgccggaagacagaagcaaagtcagcgag
ttgtacgagtgcctgcagcagagtgacgatcacagtgtcagcggcgagtggcgcctgctc
agtgcctcgggcgagcctatgtggatggctgtcaacgcttctgaaattgaggaagaaggt
gatcgtgaacgctcagtggtcatgagcattgccaatattacccgcttgaaactcttgtcc
aatgagctgatgacggccaaagatgaggccgatgccgccaacaaggccaagagcgacttt
cttgccaatatgtcccacgagatacgcaccccgatgaatgccattatcggtatgtcacaa
ctgtgcctgcagaccaaactggataacaaacagcgtaactatgtggaaaaaattgaacgg
gcgtcgcaatccctgctggggatcatcaatgacattctcgacttctccaagattgaggcc
ggcaagctggatatcgaagtggtgccgttccagctcgacagtattttggaagatctcggg
gatatgttctcggaacgtgccgctgataaacaattggagctgttgtttgccgtggcccct
ggtgtgcccagttatctggaaggggatccgctgcgcctcagtcaggtgttgattaacctg
atgaacaacgccattaaatttaccgagcgtggcgaagtgatgctgtcgataactgagctt
agccgcgagcaggatgaagtgatcctgagattcgcagtgcgcgacagtggtataggtctg
acggccgagcagcaggccaggttgtttaagtctttcagccaggcagacacctcaaccacc
cgtaaatacggtggtaccgggcttgggctggcgatttccaaacagctggtggaactgatg
gagggtgaaatcggtgtcgagagccagtttggcaacggcagttgcttcttctttaccgtg
cggctcaaagtggcggaaaacgacaagctgaatgtcgagcaggaactggaaggtatgccc
attctggtggtcgatgacaacggcaccgccagagatatcttgcgcactacgctcgagagc
atgggctttgccgtcgactgtgcccgcagcggcatggaggcgctggataaggtgaagcgc
aagccctacaagatggccctgatcgattggaaaatgcctgagatggacggtatggaaact
gcccggcaaatattgcagctaaaggagccgccgctgatcctcatggtatcggcccacgcc
aacagtgactttatcgaacagttggagcaactcgggatcaacggctatatcaccaagccg
gtcagtgcctccagattactcgacggcattatgttggcgcttggacgtcaggggcatatt
cccgtcaggcgcaaggtactggatctcgaatcgctgcaactggcggctcttgttggcaaa
cgcgtgctgctggtggaagacaatgagatgaatcaggaggtggcgaccgagtttctcgag
caggtaggcatagacttgtctatcgcagaaaacggccagatagcgctggagaagctggcg
cagcagcagtttgatcttgtgctgatggactgccagatgccagtaatggacggctatcag
gccacagaggcgctgcgcaagatgccagggcttgagcagttacctgtggtcgccatgacg
gccaatgccatggccggcgacaaggagatgtgcctgagggccggcatgaatgatcacatt
gccaagccgatagaagtcagcctcttgtatcaggtgttgttgcagtatctgggaggggga
caagccccagttgcagggaataataacacaggtatggccgatggagatgattctgaggat
ctggtgagctggccggaacaagagagcctggatatcgaccggggactacaactggtgcag
cattccgagcgcctctatcgacgtatcctcgaacgtttcctaggtagtcagggcaacgtc
ggcaaacgtattcgcaaggcgctcaaggaacagcagcaggaagaagcggtcagggtggcg
cataccctaaaggggctggccggtaatctctgctctgagcctttggtggaagaggcgcgg
caattggaagccaagttggcagccggcgaagagtgtgagcaagagttgcaggcagtggaa
aagcgggtcgccgttattgtcgatgccattgcggactggatgggggataagccgcaaagc
gcttctcagacggaagctgatgccgccgaggagatggataccgagacgcttaaaaccgct
ttggagcaactgcaaagcagtctggaagatgctgatgccgaagccgtcgtccaactggaa
gcattgagtcgccgggtgagtaaaccgctgtggcagcgcttgaaacctgtcagcagcatg
gttggcagctatcagtttgatgatgctgccgatcttgtccgcgagctgcagcaagagctg
aacgagactgagtga
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integrated database retrieval system
