Shewanella chilikensis: GII14_18055
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Entry
GII14_18055 CDS
T08813
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
schk
Shewanella chilikensis
Pathway
schk00630
Glyoxylate and dicarboxylate metabolism
schk00680
Methane metabolism
schk01100
Metabolic pathways
schk01120
Microbial metabolism in diverse environments
schk01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
GII14_18055
09102 Energy metabolism
00680 Methane metabolism
GII14_18055
Enzymes [BR:
schk01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
GII14_18055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Fer2_4
NAD_binding_8
Fer4_7
Pyr_redox_3
Fer4_6
DAO
Fer4_8
HI0933_like
Fer4
Fer4_18
FAD_oxidored
GIDA
FAD_binding_3
AlaDh_PNT_C
Fer4_16
NAD_binding_7
Fer4_10
FAD_binding_2
Fer4_9
Thi4
Amino_oxidase
Fer4_2
2-Hacid_dh_C
Fer4_17
Fer4_15
Fer4_21
Fer4_4
Oxidored_nitro
Lys_Orn_oxgnase
XdhC_C
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
QIJ05864
UniProt:
A0A6G7LVU7
LinkDB
All DBs
Position
3957840..3962087
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AA seq
1415 aa
AA seq
DB search
MFEIYIDGQAVSAFEGETLLQAAQRAGIDIPCLCHHTDAHAATTGGADEHLCQLTRLDQI
MADGDRPLLACSTPAIAGMQLKNHTQAVHSHRQQTLKRILKDHFADCEAPCQQACPAGVD
VQSYLYHIGQGNHTEAVRILKQTLPLPLSIGRVCPAFCESACRRALIDEPLAIRQLKRHA
ADLDLADTEPYQPPKAAPSGKKVAIIGAGPAGLSAGFFLANQGHEVDIFEAAPKAGGWLR
YGIPEYRLPKAILDKEIALLERSGIRIHTNTAIGEQIRLPKLVEEYHALCLAMGAQKAVP
LNYPGSDLPGCYLGVDYLKDLAMDHQLVTGKKVAVVGGGNTAIDCARSARRLGAEVTLIY
RRTKEEMPAEAFEIHEAEQEGIHFLLLTNPVANHAASDGRLARVTLEKMSLGEPDASGRR
RPQPSGETFDCEFDTLIAAVSQSPDLAFLQQAENRLLQGAPALSRWNTINGCDISMSTGL
EKLFVIGDVRRGPATAVEAVADGRRAAEAIDALFNKGLSCPLTPVEFNASKAIGLKSQQD
LPKDLFPSQVKSARVKMPELPVAERLSNFAEVELGLTPQMAEAEAKRCLECGCQANMDCR
LRDYASEYKVSSQGLLEQDSSGESALLARHFAQDLSAPFIRFDANRCISCGACVDICHRR
SGHKAISFEADQFSALPGGNSERRAPRAGFSVSMADSDCVQCGNCLQVCPTGALVDARHK
TQGQAPDIKVTSTICTYCGVGCRIRFKVDTSQNRILAAEGDVRSPVNQGMLCVKGRFGFD
FINSKERLTQPLIRRNGKLEPCSWQTAISYIAAHWQEQLEQFGPSSFGALASAKATNEEN
FLLQKLFRAIIGSNNIDHCARLCHASTVTGLYDALGSGAMTNDIPGIEDSDLIFILGSDT
DCAHPIIASRIKSVVNRGKARLLVADPKRVSIADSAELFVRHRPGTDVMLLNAIMQQILL
NDWHDKAYIRSRTTGFEALREELLRPDYSLEQAARVTGVSSSEIAAMAEMLGTAKKTALY
YAMGITQHTTGHDNVTAIANLQLLLGNLGLDGAGINPLRGQSNVQGACDMGALPNYFSGY
QRLDDDAARLKLARAWGTDKLSPETGIPASHMMQAILDGRLQSLFVMGENPVLSDPDQAH
VLKALNKLPFLVVQDIFLTETAEMADVVLPAAAFAEKRGHFTNTERRVQRLEVALQSPGS
ARPDWQILQLLANAMDADWHYGDEQAIWQEVTALTPSYAGISWHRTTDNPAGLQWPCPDE
LHPGTRVLHRNSFTHGKGRLQPVNYRLPAELPDDDYPLMLSTGRLLEQFHTGTMTRKTAG
LDELGSPRVMISVEDAERLGVGKGDWLKLESRRGEILIQAFVSRRAQPGVLFLPFHFVEA
AANKLTINALDPVAHIPEFKVCAVKAERAEAPLAS
NT seq
4248 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaatctatatcgacggccaggccgtcagcgcctttgagggcgagaccctgttg
caggcggcccagcgggccggcatcgacattccttgtctgtgtcaccatacagacgcccac
gcggctaccacaggaggcgctgatgaacacctgtgccaactgacccggctcgaccagata
atggccgacggtgacagaccgctgctggcctgctcgactccggcgattgccgggatgcag
ctcaagaatcatacccaggcagtgcacagccatcggcagcagacgctgaaacggatattg
aaagatcacttcgccgattgtgaagccccctgccagcaagcctgcccggcaggcgttgat
gtgcagtcttacctgtatcacataggtcagggcaaccatacagaagcggtgcggatcctc
aagcagaccctgcctttgccactgtctatcggtcgggtctgcccggcattttgtgaaagt
gcctgtcgccgcgccctgatcgatgagccactggcgatacgtcagctaaaacgccacgcc
gccgatctggacttggccgataccgaaccctatcagccgcccaaggccgcccccagcggt
aagaaggtggccataatcggtgcaggtcccgccgggctcagtgccggtttcttcctcgcc
aatcagggccatgaagtggacatctttgaggccgctcccaaggccggtggctggctaaga
tacggcattccagaatatcgcctgcccaaggcgatactcgataaagagatagcgctgctg
gagcgcagcggcattcgcattcacaccaacacagccataggcgagcagatacggctgccg
aaactggtcgaggagtatcatgccctctgtctggcgatgggcgcgcaaaaggctgtgcca
ctcaactatcccggcagcgaccttcccggctgctatctcggggtcgactaccttaaagat
ctggcaatggatcaccagttggtcactggtaagaaggtcgccgttgtcggcggcggcaat
actgctatcgattgtgcccgcagcgccagacgcctcggcgccgaggtgacactgatctac
cggcgtaccaaagaggagatgccggccgaagcctttgaaattcatgaagctgagcaggaa
ggtatccacttcctgctactgaccaatcctgtggccaaccatgccgccagtgacggccgt
cttgcacgagtcacgctggaaaaaatgtctttgggtgaaccggatgcctccggccgccgc
cgacctcagcccagcggcgaaaccttcgactgcgagtttgataccctgatcgccgccgtg
tcccaatcaccggatctggcctttctgcaacaggccgaaaaccgtctgctgcaaggtgct
ccggcgctcagccgctggaatacgatcaacggctgcgacatcagcatgagcactgggctg
gaaaaactgtttgttatcggtgatgtgcgccgcggccccgccactgcggtggaagcggtc
gctgatggtcgccgcgccgccgaggccatagacgccctgttcaataaggggctcagttgc
ccactgacgccagtggagttcaatgccagcaaggcgatagggctcaagtcccaacaggat
ttacccaaagatcttttcccctcacaggtgaaaagtgccagagtcaagatgccggaactg
ccggtggccgagcgcctgagtaactttgccgaagtagagctgggactgacgccgcaaatg
gccgaagccgaggccaaacgctgcctcgaatgtggctgtcaggccaatatggactgtcgc
ctgcgagactacgccagtgaatacaaggtcagcagccagggcttgctagagcaagatagc
agtggcgaatcggcactgctggccagacactttgcccaagacttgagtgcgccctttatc
cgtttcgacgccaaccgctgcatcagctgcggtgcctgcgttgacatctgccaccgccgc
agcggccacaaggcgatcagctttgaggccgaccaattctcggcgctgccaggaggcaat
agcgaacgccgggcccccagagccggtttcagcgtctccatggccgacagcgattgtgtt
cagtgcggcaactgcctgcaggtatgcccgaccggcgccttggtagatgcccgccacaag
acccaaggacaagcccccgacatcaaggtgaccagcaccatctgcacctattgcggcgtc
ggttgtcgcatccgcttcaaggtagacactagccagaatcgtatccttgcggccgaaggt
gatgtgcgctcacctgtgaaccagggcatgctctgcgtcaagggtcgcttcggcttcgac
tttatcaacagtaaagagcgcctaacccagccactgatacgccgtaacggcaagttggaa
ccctgtagctggcaaacggccatcagctatattgccgcccactggcaagaacaattggaa
cagtttggcccgagttcattcggcgcactggcatccgccaaggccaccaatgaagaaaac
ttcctgctgcaaaagctgttcagagccattatcggcagcaacaacatagatcactgcgcc
cgcctgtgccatgcctccactgtgaccgggctctacgatgccctcggcagcggcgccatg
accaatgacattcccggcatagaggattcagatctcatctttatcctgggctcggacacc
gactgtgcccaccccatcattgcctcgaggatcaagtcggtcgtcaatcgcggcaaggcc
agactcctggtcgccgatcccaagcgggtcagcatagccgacagcgccgagctatttgtg
cgtcatcgccccggcacagatgtgatgctgctcaacgccatcatgcagcagatactgctc
aacgactggcatgacaaggcctatatccgcagccgcaccacaggctttgaggccttgcgc
gaagaactgttgcggccggattacagcctggagcaggccgccagggtgacaggcgtcagc
agcagcgaaatagcggccatggccgaaatgctgggcaccgccaaaaagaccgccctctac
tacgccatggggatcacccagcacaccactggccatgacaatgtcaccgccattgccaat
ttgcagctattgctgggtaacctcgggctcgacggcgccgggatcaaccctttgcgcggc
cagagcaatgtccagggtgcctgtgatatgggcgccctgcccaactatttcagtggctat
caacgtctggatgacgatgctgcgcggctgaaactggcgcgggcctggggcactgacaag
ctgagccctgagacaggcattccggcctctcatatgatgcaggcgattttggatggccgg
ctgcagagcctgtttgtgatgggcgaaaacccggtactgagcgaccccgaccaggctcat
gtgctcaaggcgctgaataagctgccatttttggtagtgcaggatatatttctcaccgaa
actgccgaaatggccgatgtggtattgccggcagcagcctttgccgaaaagcgcggacat
ttcaccaataccgagcgccgggttcaaaggttggaagtcgccttgcaatcgccaggtagt
gcccgcccggactggcagatactgcaactgctggccaatgccatggacgccgactggcac
tatggcgatgaacaggcaatttggcaggaagtcacggccctgactcccagctacgccggg
atcagttggcacagaaccacggataacccggccgggttgcaatggccctgtccagatgag
ctgcacccgggtacccgggtattgcaccgcaacagctttacccatggcaaagggcgactg
cagccggtcaattatcgtttaccggctgagctgccggatgatgactatcccttgatgctg
tcgaccggacgcctgctggagcagttccacaccggcaccatgacccgtaaaaccgccgga
ctggacgaactcggctcccccagagtgatgatctcggttgaggatgccgagcgtttgggc
gtcggcaagggcgactggctcaaactggaaagccgccgcggtgaaatcttgattcaggcc
tttgtcagccgccgagcacaacctggcgtcttgttcctgccgttccatttcgttgaggcg
gcagccaacaagctgaccatcaatgcgctggatcccgtggctcacattcccgagttcaag
gtatgcgccgtaaaggctgagcgcgccgaggcgcctttggcttcctaa
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