Shewanella chilikensis: GII14_19155
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Entry
GII14_19155 CDS
T08813
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
schk
Shewanella chilikensis
Pathway
schk03420
Nucleotide excision repair
schk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GII14_19155 (uvrD)
03430 Mismatch repair
GII14_19155 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schk03400
]
GII14_19155 (uvrD)
Enzymes [BR:
schk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GII14_19155 (uvrD)
DNA repair and recombination proteins [BR:
schk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GII14_19155 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GII14_19155 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QIJ06065
UniProt:
A0A6G7LWQ3
LinkDB
All DBs
Position
complement(4212158..4214323)
Genome browser
AA seq
721 aa
AA seq
DB search
MDVSSLLDGLNDKQREAVAAPQSSMLVLAGAGSGKTRVLTHRIAWLLQVENQSPYSIMAV
TFTNKAAAEMRERVEKIVGNHMGRMWIGTFHGLAHRLLRTHWQDAGLPQNFQILDSDDQL
RLLKRILKSLNLDEKQYPPRMVASYINGKKDEGLRPKHLDGGIFPMEQKLIQIYQVYQES
CDRAGLVDFAEILLRAHELFLNKEHILAHYQDRFRNILVDEFQDTNAIQYAWIRVLAGKS
ANVMIVGDDDQSIYGWRGAQVENLHKFLQDFPNAETIRLEQNYRSSGNILKASNELIANN
PDRLGKQLWTEDVDGEPISVYCAFNEMDEARFIIGRIGDWQDKGGSLSDCAILYRSNAQS
RVLEEALLHKGLAYRIYGGLRFFERQEIKDAMGYLRLIANRDDDAAFERVVNTPARGIGD
RTLDILRTTARQQQLTLWQACVRLLEEKVLAGRAANAVRSFMDLIVQLRNDTEELPLYRQ
ADIVIQNSGLKAMYEQEKGEKAQARVENLEELVTAARTFEVPEELVDMGELNAFLSHAAL
EAGEGQADAHTDAVQLMTLHSAKGLEFPLVFMAGVEEGLFPSQLSLEEGERLEEERRLCY
VGMTRAMQQLYITYAESRRIYGRENYSRPSRFIKEIPPQYLQEIRLKAQVATPMANNRFS
KSQSSFNDTGFNVGQRVLHPKFGEGIVTNFEGQGAQARVQVNFDDFGSKWLVVAYAKLTA
C
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggacgtatcttctttattggatggcctgaatgacaagcagcgtgaggcggtagccgca
cctcaatcgagcatgctggtgctcgccggagccggtagcggcaagacccgggtactgact
cacaggattgcctggctgctgcaggtggaaaaccagagcccatactccattatggcggtg
acctttaccaataaggcggccgccgagatgcgggagcgggtggagaagatagtcggcaac
catatgggccgcatgtggatcggtaccttccatggtctggcccatcgtctgctgcgtact
cactggcaggatgccggcctgccgcagaattttcagatccttgactcggatgatcagctc
cgcttgctcaagcgtatcctcaagagcctgaatctggatgagaagcagtatccgccgcgg
atggtggccagttatattaatggtaagaaggatgaaggattacgcccgaagcatcttgat
ggtgggattttccccatggaacagaagctgattcaaatctatcaggtgtatcaggaatcc
tgtgatcgtgccggtctggtggattttgccgagatactcttgcgggctcacgagctgttt
ctcaacaaggaacatattctggcccactatcaggatagattccgcaatattctggtggat
gagtttcaggacaccaacgccattcaatatgcctggatcagagtgctggcgggcaagagc
gccaatgtgatgatagtgggtgacgatgaccagtccatctatggctggcgcggtgcccaa
gtggaaaacctgcacaagtttttacaggacttccccaatgccgaaactattcgcctggag
caaaactaccgctccagcggcaatattctcaaggcctccaacgaacttatcgccaacaac
ccggatcggctgggtaaacagctgtggaccgaagatgtcgatggtgagcctatttcagtt
tactgtgccttcaatgagatggatgaagcccgcttcatcataggccgcattggcgactgg
caggacaagggcggcagtctcagtgactgcgccatcctctatcgcagtaatgctcaatca
cgggtattggaagaggccttgctgcacaaggggctggcttatcggatctatggcggcttg
cgcttcttcgagcgtcaggagatcaaggatgccatgggatacctgcgtctgattgccaac
cgcgacgatgacgccgccttcgagcgggtggtcaacactcccgccagggggataggcgat
cgcaccctggatattctcagaaccacggctcggcagcagcaattgaccctgtggcaggcc
tgcgtccgtctattggaagagaaggtcttggccggtcgcgccgccaatgcggtgcgcagc
tttatggacctgatagtgcagctgcgcaacgacaccgaagagctgcccctctatcgccag
gcggatatagtgatccagaactccgggctcaaggccatgtatgagcaggaaaagggcgaa
aaggctcaggccagagtggaaaaccttgaggaactggtcaccgcggcgcgcaccttcgaa
gtgccggaagagctggtggacatgggtgagttgaatgccttcctgtcccatgctgcgctg
gaggcgggagaaggccaggccgatgcccacacagatgcggtgcagttgatgacgctgcac
tcggccaaggggctggagttcccgctggtgtttatggccggtgtcgaagaagggctgttc
cccagccagttgtcgctggaagagggcgagcgtttggaagaagagcggcgcctgtgttac
gtgggcatgacccgcgccatgcagcagctgtatatcacctatgccgagtcgcgccgcatc
tatggccgtgaaaactactcgcggccgtcgcgctttatcaaggagatcccgcctcagtat
ctgcaggagatccgtctcaaggcgcaggtggccacccccatggccaataacaggtttagc
aagtcgcaaagcagcttcaacgatacgggcttcaatgtcggccaacgggtgctgcatccc
aaattcggtgaggggatagtgaccaattttgaaggccagggcgcacaggccagggtgcag
gtgaatttcgatgacttcggcagtaagtggttggtggtggcctacgccaagttaaccgct
tgctga
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