Shewanella chilikensis: GII14_19630
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Entry
GII14_19630 CDS
T08813
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
schk
Shewanella chilikensis
Pathway
schk00300
Lysine biosynthesis
schk00470
D-Amino acid metabolism
schk01100
Metabolic pathways
schk01110
Biosynthesis of secondary metabolites
schk01120
Microbial metabolism in diverse environments
schk01230
Biosynthesis of amino acids
Module
schk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GII14_19630 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GII14_19630 (dapF)
Enzymes [BR:
schk01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GII14_19630 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QIJ06155
UniProt:
A0A6G7LWZ1
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Position
complement(4323073..4323900)
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AA seq
275 aa
AA seq
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MIHFTKMHGLGNDFMVVDGVTQNVYFSPEQIRRLADRNFGIGFDQLLLVEPPYDPDLDFH
YRIFNADGSEVEQCGNGARCFARFVRNKGLTQKYKIKVSTSSGKMTLRLERDGNVTVNMG
VPILDPARIPFKAKKAEKTYLLPTEGQTFLCGAVSMGNPHCVLEVEDVAATDVDFIGAQL
TNHERFPKGVNVGFMQVINKGHIKLRVYERGAAETLACGSGACAAAVVGQLQGKLGNTVR
VDLPGGTLTIKWDGEGKPLWMTGPAEQVYDGQIQI
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
ttgatccactttactaagatgcatggtctgggcaacgactttatggtcgtcgatggcgtg
actcagaatgtgtacttttcgccggagcagatccggcgcctggccgaccgcaacttcggt
atcggtttcgatcaactgctgctggtcgagccgccctatgatccggatctggactttcat
tatcgtatcttcaatgccgatggcagcgaggtcgaacagtgcggcaacggcgcccgttgc
ttcgcccgttttgttcgcaacaagggcctgactcagaaatacaagatcaaggtcagcacc
tcatccggcaagatgaccctgcgcctggagcgtgatggcaatgtcaccgtcaatatgggc
gtacctatcttggatccggctcggatccccttcaaggccaaaaaggccgaaaagacctac
cttttgccaaccgaagggcaaaccttcctctgcggtgctgtctccatgggtaacccccac
tgcgtgctggaagtcgaagatgtggctgccacagatgtcgattttattggcgcgcagctg
accaatcacgaacgcttccccaaaggggtcaatgtcggctttatgcaggtgatcaacaag
ggccatatcaagctcagggtttatgagcgcggtgccgccgaaaccctggcctgtggcagt
ggtgcctgtgcggctgctgtggtgggccaactgcagggcaagctgggcaacactgtgcgg
gtcgacctgcccggcggcaccctgacaatcaaatgggacggtgagggcaagccgctgtgg
atgacgggcccggccgaacaggtatacgacggacagatacagatatga
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