Shewanella chilikensis: GII14_20680
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Entry
GII14_20680 CDS
T08813
Name
(GenBank) GAF domain-containing protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
schk
Shewanella chilikensis
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
schk03000
]
GII14_20680
Transcription factors [BR:
schk03000
]
Prokaryotic type
Helix-turn-helix
Other families
GII14_20680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
HTH_30
PAS_4
AAA_5
Mg_chelatase
HTH_20
AAA_2
HTH_7
HTH_17
HTH_23
HTH_22
HTH_1
HTH_29
nSTAND6
AAA_3
HTH_28
PAS
nSTAND3
HTH_Tnp_ISL3
HTH_Tnp_1
DUF2089
Phage_NinH
HTH_IclR
AAA_7
HTH_11
Motif
Other DBs
NCBI-ProteinID:
QIJ06350
UniProt:
A0A6G7LX83
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Position
complement(4572882..4574678)
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AA seq
598 aa
AA seq
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MTLKTHSQSWLSASWQRCQGAGLNPAAIPDELRLNTAALDERRQRHGRLLQAVEHSALPL
FNQLMGRTQSRLILSDPQGFVLHHWGVSRYSQKLANIALDTGVNWMEQYKGTNAIAAALS
ERQCVSVIGEQHFIKSHRFMSCTASPLFSPAGELLGALDITSEQQIHTPKTAILVSSLAQ
QLELALLCRLPGAAVRLDLAPQQTLLHSGWQGVLVLDLDGRVLGANPMARQLLKGINLGQ
IHQALSPQVLSRGSGRLQQGLVFRTQALELPQHTKPVVGANLNRENRESSAAFKEPRLEQ
AWQQARKVLARNIPLLILGETGVGKEQFVKQLHVQSPRHQQPFVAVNCAAIPAELVESEL
FGYQAGAFTGASRQGYVGKIRQAHQGSLFLDEIGEMPLAAQSRLLRVLQEREVVPIGSNQ
AHSVDIQVIAATHMDLPALVQQGAFRADLYYRLNGLQVTLPALRQRSDLRRLIHKLHQRY
RVRPQSLCPVLEQRLLQYHWPGNLRELDNLMQVACLMAEEFPELNWQTLPESLQQTLVAT
EETVTGLVPAPGNNLHRQMQTQIRDTWLACNGNVSEAARRLGISRNTLYRKLKALALK
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgacactcaagacccattcccaatcctggttatcagcttcctggcaacgttgccagggg
gccgggctcaatcccgccgccatacccgatgaactcaggctcaatactgcagcccttgat
gagcggcgccagcgccatggcaggctgctgcaagccgtggagcacagtgcactgccactg
ttcaatcaacttatggggcgaacccagagtcggctcatcctctcggatcctcaaggtttt
gtgctgcatcactggggcgtgagccgctactcacagaagcttgccaatattgccctggat
accggggtcaactggatggagcaatacaaggggaccaatgccatagccgcggcactcagc
gaacgccagtgtgtttcggttatcggtgagcagcactttatcaagagccacagatttatg
agttgcaccgccagcccgctgttttccccggccggtgagttgctgggagccttggatatc
accagtgagcagcaaatccataccccaaagacagccattttggtgtccagtttggcgcag
cagttggagttggccttattgtgccgactccccggcgctgctgttcgattggatctggcg
ccgcagcagaccctgctgcattcaggttggcaaggcgtattggtgctcgaccttgatgga
cgggtgctgggcgccaaccctatggcaaggcaactactcaaaggcattaacctgggccaa
attcaccaggccttgtcccctcaggtattgagccggggcagcggccgcttgcagcaggga
ttggtgttcagaacccaggcgttggagttgcctcaacataccaagcctgtggttggtgcg
aacctgaaccgggagaaccgagaaagcagcgcagcttttaaagaacccaggttggagcaa
gcctggcagcaggcgcgtaaggtgttggcacgaaatattcctttgctgatcctgggggaa
accggagtgggcaaggagcagtttgtcaaacagctgcatgtgcaaagtcccaggcaccag
cagccttttgtggcagtcaactgcgccgcgatcccggcggagctggtggaatcagagctg
tttggttatcaggcgggtgcctttaccggagcttccaggcagggatatgtcggcaaaata
cgtcaggcgcaccagggatccctgtttctggatgaaataggcgagatgcccctggcggcc
cagagccgtttgcttagggtgttgcaggagcgcgaggtggtgcccattggcagtaatcag
gcacacagcgtcgacattcaggtgattgccgccactcatatggacttaccggcattggtg
cagcagggggcctttcgcgccgatctctattaccggctcaatggcttgcaggtcacactg
cctgcattgcgccagcgaagcgacctgcggcgtctgatccacaaattgcaccagcgctat
cgagttcggccccagagcctgtgtcctgtgctggagcagcgattgctgcaatatcattgg
ccgggaaacctacgggagctggataacctgatgcaggtagcctgtttgatggccgaagag
ttccctgaactcaactggcaaacgctgcctgaaagtctgcagcagaccttggtggctaca
gaagagactgtgaccggtctggtacccgcgccgggcaacaatctgcaccgccaaatgcag
acgcaaattcgcgacacctggctggcttgcaatggtaacgtcagtgaagcggcacgccgc
ttggggattagccgcaacaccctataccgtaagcttaaggcgttggcgctgaagtag
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