Shewanella chilikensis: GII14_21640
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Entry
GII14_21640 CDS
T08813
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
schk
Shewanella chilikensis
Pathway
schk00061
Fatty acid biosynthesis
schk00071
Fatty acid degradation
schk01100
Metabolic pathways
schk01212
Fatty acid metabolism
schk02024
Quorum sensing
schk04146
Peroxisome
Module
schk_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
schk00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GII14_21640
00071 Fatty acid degradation
GII14_21640
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GII14_21640
09145 Cellular community - prokaryotes
02024 Quorum sensing
GII14_21640
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
schk01004
]
GII14_21640
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schk04147
]
GII14_21640
Enzymes [BR:
schk01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GII14_21640
Lipid biosynthesis proteins [BR:
schk01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GII14_21640
Exosome [BR:
schk04147
]
Exosomal proteins
Exosomal proteins of breast milk
GII14_21640
Exosomal proteins of breast cancer cells
GII14_21640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QIJ06510
UniProt:
A0A6G7LXP2
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All DBs
Position
4788700..4790493
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AA seq
597 aa
AA seq
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MSLEQYRITHLLRQQLEARAEDIALEGFEIAAPWDKVSWNEFDRISAAIAGILIANGFEV
QDRAVILSHNCPQWTCADVGVVRARGVVVPVYPTSTLKQAAYIINDAGAKVLFVANKAQY
RLACQLEAMCPTLELVVVFDKHVTLEKLHHHHLDVLLNQVVSEEARTELAVREQNANLDD
LLTLIYTSGTTGDPKGVMLDQRNFASAMRQHFQLIPFEADQVSLVFLPLSHVYERGWTFY
VLSRGGRNVYLADTHRVKEAIAAVRPHTLCVVPRFLEKVYSAVQDKVTRAGNGNRKLFAW
ALAVGERQFEVMQGRAKPSKKLSLQWYLADKLVYRRLRAALGGRLRLMPCGGAALDAKVS
AFFAAINLPVLCGYGMTETTATVTCNTLDNRVTGSNGRCMPEVEIRLGAENEILVRGDTV
MRGYFNRPEDTAEAFEDGWLKTGDAGYLDEQGNLFITDRIKELMKTSNGKYIAPQRVEGK
VGCCPFIEQVAVVADARNYVTALIVPAFEALEVWARQKGIRYESPLELIRHSHVVEHFEE
RLKHLQQELAGFEQIKKFTLLPEAFSMEAGLITPTLKLRRKMIYHKYSREINAMYGG
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgtctctagagcagtacagaatcacccatctcttgcgtcagcagcttgaagcgcgtgca
gaggatatcgccctggaaggcttcgaaatagctgcgccttgggataaggtcagctggaac
gaatttgaccgcatcagtgcggctattgccggaatcctgattgccaatggctttgaggtt
caggatcgcgccgtgatcctgtcccataactgcccgcagtggacttgcgccgatgtcggc
gtcgttcgtgcccgtggcgttgtggtgccggtttaccctacctccaccctgaagcaagct
gcctatatcatcaatgatgccggcgcaaaagttttatttgtggccaataaggcgcagtat
cgactggcttgtcagttagaagcaatgtgtccgacattggaacttgtggtggtgtttgac
aaacatgttactttggaaaaactgcatcatcatcatctggatgtattactgaaccaagtt
gtatccgaagaagcacgcactgagttggctgtccgtgaacagaatgccaatctggatgac
ctgctgactctgatctacacctcaggcaccaccggcgatcccaagggggtgatgctggat
caacgtaactttgcttcggctatgcgccaacatttccaattgatcccctttgaagcggat
caggtttccttggtattcctgcctctgagccatgtttatgagcgcggttggaccttctat
gtactcagtcgtggtggcagaaatgtctacctggctgacactcatagggtaaaggaagcc
attgccgccgtgcgtcctcacaccttgtgtgtggtgcccagattcctggagaaggtttac
agcgcagtacaggataaagtgacccgggccgggaatggcaatcgcaagttatttgcttgg
gcactggctgtgggcgaacgccagtttgaagtgatgcagggccgggctaaacccagtaaa
aaattgtcattgcagtggtatttggctgacaagttggtttatcgccggctcagagcggct
cttggcggtcgtctgcggttgatgccctgtggtggtgccgccttggatgctaaagtgagt
gcattctttgctgccattaacctgccggtgctttgtggttacggtatgacagaaaccacg
gcaaccgtcacctgtaatacattggacaatagggtgacaggttccaatggtcgctgtatg
cccgaagtggaaattcgtctcggggccgagaatgagattttggttcgcggcgataccgtg
atgcgcggttattttaaccgtcccgaagacaccgctgaagccttcgaggatggttggctc
aagaccggggatgccggttacctggatgaacagggtaatctgtttatcaccgacaggatc
aaagagctgatgaagacctccaatggcaagtatattgcgccacagcgggtcgaaggcaaa
gtaggttgctgccccttcatcgaacaggtggcggtagtcgccgatgcccgtaactatgtg
acggcactaatcgttcctgcctttgaagctctggaggtttgggccagacagaaggggatc
cgttatgagtcaccgctggagttgatacgtcacagccatgtggtggagcattttgaagaa
cggctcaaacacctgcaacaggaactggcgggttttgagcagattaaaaagtttaccctg
ttgcctgaggccttctctatggaggcgggtttaatcaccccgaccctcaagctcagacgc
aagatgatctatcacaagtattcccgtgaaattaacgccatgtatggcggttaa
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