Shewanella chilikensis: GII14_21720
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Entry
GII14_21720 CDS
T08813
Name
(GenBank) TonB-dependent receptor plug domain-containing protein
Organism
schk
Shewanella chilikensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
OMP_b-brl_3
TrAA12
CFAP143
Motif
Other DBs
NCBI-ProteinID:
QIJ06524
UniProt:
A0A6G7LXQ8
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All DBs
Position
4809780..4811951
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AA seq
723 aa
AA seq
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MSHIPVKLSALALALGCAMQANAASIERDPLVNNAMDVIVVHGERANATEVATTNWSISE
EEIKALGAQSLDEVLKNVPGVYVRYGGEGTPRVDIRGFKTRHVTLLINGVPANSADDGQF
DPSVIPTSQIARVEVSVGPTSVLYGPGGAGGVINIITKRGDSAPAVSGNLELAKDDTFKG
DISAAGSGDNWQGLISASYQHTDGFPMSSDYQTTEYQDKYQRNNADKELSNLYAQGSYWL
SDNTQLIANMALRSGEWGKPPRDGSGSGRVKFERVDDYDSQTFQLGLAHKFNDTFTFRGF
GYHNQSDTYETVYGDNSYAELTQAQDGSSKVQGANLQLITDFDTAGILTTSVIAEKQSWE
AVAESFGSSKKSGSSKIAAAKGSGGGNGSGGGSGSGGGSGTGGGSGSGGGTGTGGGSGSG
GGTGTGGGSGSGGGTGTGGGSGESFDDSAWVYTAAAEYQFQSDGDWGFTLGGAYHDMDKT
EGNENDYSALASGFWQVADDTRLSLSAARKVRFPSMRNLYSLSSGNQELETEISKHVELG
LEQGLGMNTELQLYLYHTDADDYIAKDASGMYQNIGNYRFQGLDTVLSNKSIDNLDLSLS
YSYLHAEDRDSSTGFDGLDYRPKHQLRFQLGYKLPTETRIHLNVERIMDQNYYDQEKIGG
QKVWQEKSLDDYTLVDINLVQPLLKDNLELYLRATNLLDENYYQSDSLPQAGRQVFVGIN
WQI
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtcccatattccggtaaaactctctgccctcgcactggcgctgggctgtgccatgcag
gccaatgcggcctctattgaacgtgaccctctggtcaataacgccatggacgtgatagta
gtgcacggtgagcgtgccaacgccaccgaagttgccaccaccaactggagcatttctgaa
gaagaaatcaaagctctgggggcccagagcctggatgaggtgttgaagaatgttcccggc
gtttacgtgcgttacggcggtgagggcactccaagggtggatatccgtggtttcaagacc
cgccatgtcactctgttgatcaatggtgtaccggccaatagtgccgatgatggtcagttt
gatcccagcgtgatcccaaccagccagattgccagagttgaagtctccgttggcccaacc
tcggttctctatggtccaggcggcgccggcggtgttatcaacatcatcaccaagcgtggc
gacagcgctccggcggtatccggcaacctggaattggccaaggatgacaccttcaagggc
gatatcagtgccgccggttcgggcgataactggcagggactcatcagtgcaagttatcag
cacacagatggtttccctatgtcttctgactatcaaaccactgagtatcaggataaatat
cagcgcaacaacgcagataaagaactgtccaatctgtatgcccaaggcagctattggctc
agcgataatactcaactcattgccaatatggcactgcgttcgggtgagtggggcaagccc
ccaagagatggcagcggcagtggccgggtgaagtttgagcgggtcgatgactatgattca
cagactttccagttgggcctggcacataagttcaatgatactttcactttccgtggcttt
ggttatcacaaccagagtgatacctatgaaaccgtgtacggcgacaatagctacgccgag
ctgactcaagctcaggatggctcctccaaagtgcagggcgcaaatctgcagttgatcacc
gacttcgacactgcaggtatcctgactacctcagtgattgctgaaaaacagagctgggaa
gcggtagctgaaagctttggctcctcgaagaagtccggcagcagcaagattgcagcagcc
aagggctctggcggcggtaatggctcaggtggtggcagcggttccggcggcggtagtgga
actggtggtggcagcggttcaggcggcggtactggaactggtggtggcagtggttccggc
ggcggtactggaactggtggtggtagtggttccggcggcggcactggaactggtggtggc
agcggtgagtctttcgatgattcggcctgggtttataccgccgcggccgagtatcagttc
cagtccgacggtgattggggctttactctgggcggcgcataccacgacatggacaagacc
gaaggcaatgagaatgattactcggcgctggcctcaggtttctggcaagtggctgacgat
acccgtctgagcctgagtgcggctcgtaaggtacgtttcccctccatgcgtaacctttat
tccctgtcttccggcaatcaggagctggaaactgaaatctccaagcatgttgagttaggg
ttggagcaggggctgggtatgaataccgagctgcaactctatctctatcacacagatgct
gatgattacattgccaaagatgccagtggtatgtatcagaacataggcaactatcgcttc
cagggtttggatactgtgctgtccaacaagagtatagataatctggatttgagcttgagc
tacagttatctgcacgctgaagacagagacagcagcacaggttttgatggtctggactat
cgtcccaagcatcaactgcgtttccagttgggctacaagttgccgaccgagactcgtatc
cacctgaatgtggaacgtatcatggatcagaactactacgatcaggagaagatcggcggt
cagaaggtatggcaggagaaatccttggatgattacaccctggtggacatcaatctggta
caacctttgcttaaagataatctagagctctatttacgagccaccaacctgttggacgag
aactactatcagagtgattctttacctcaggctggtagacaagtctttgttgggattaac
tggcagatctga
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