Schlesneria sp. DSM 10557: QJS52_04080
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Entry
QJS52_04080 CDS
T10918
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
schl Schlesneria sp. DSM 10557
Pathway
schl02020
Two-component system
schl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
schl00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
QJS52_04080 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
QJS52_04080 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schl03021
]
QJS52_04080 (rpoN)
Transcription machinery [BR:
schl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QJS52_04080 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_Crp_2
P23-45_portal_barrel
LacI
Motif
Other DBs
NCBI-ProteinID:
XFP04689
LinkDB
All DBs
Position
4977224..4978708
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AA seq
494 aa
AA seq
DB search
MQLNFSHQMKMSQQMKLAPRMIQSMEILQLPTMELDERIEQELAENPCLEMRAADRDAPD
LQHNIAEAREEASEKNIAEQELQVDTAHNNEADFERLLEMSQEWPEDNYTSGSKPSSNRM
EEDGDRQHDMISNVAEKPQSLHEYLLEQFGFFSVPAEIRDFGQFLIQNLDPNGRLPSSLP
DLIQTYGKSIADVDAQAALQLVQRLDPLGCGARDAKECLLLQLRDDMPYRDVLATLIGSH
LEDVAQNRLPLIERRTGYSIETIKAAIEELRHMNPFPGRGFEARPAQAVTPDVFVEQNGD
NKWVVRVLDEYTPRLRISKHYQQILRDGTDQKTKEYIKRKIDSAKWLIESIEQRHNTLKR
VAQSIVDKQTAFLEYGPEAIVPLKMQEIADVVKVHVTTVSRAVDDKWIQTPRGLYPLKKF
FGGGTVTESGEEVAWDIIRIKLKEIVDNEDKNDPLSDDALVDELAKFGYTLARRTVTKYR
KALDIPSSRQRRAY
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgaacttctcacatcagatgaagatgagccagcaaatgaagctggctcctcgc
atgattcagtcgatggaaatcctccaattgccgaccatggaattggatgagcgcatcgag
caggaactggctgaaaacccctgcctggagatgcgggcggccgatcgcgacgcgcccgat
ctacagcacaatattgccgaggcacgggaagaagcatctgaaaagaacattgcagaacag
gaacttcaggtcgacacggctcataacaacgaagccgacttcgaacgactgctcgaaatg
tcgcaggagtggcctgaagacaactacacgtcgggcagcaaaccttcgtccaaccgcatg
gaagaggatggcgaccgacaacatgacatgatttccaatgtcgcggaaaagccgcaatcg
ctgcatgagtacctgctcgagcagttcggctttttcagtgtcccggcggaaatacgcgat
ttcggtcagtttctaatacaaaatctggatcccaatggccgacttcccagcagcctgccc
gacctgattcaaacgtatgggaagtccatcgccgatgtcgacgcacaggccgcattgcaa
ttggtccagcgactcgaccctctcggatgtggtgcccgtgacgcgaaggaatgtctcctt
cttcagctccgcgacgatatgccctaccgagatgtcctcgccactctgatcggctcacac
cttgaggacgtggctcagaatcggctgcctctgatcgaacgccgaaccggctattcaatt
gaaacgatcaaagccgcaattgaagagttgcggcacatgaatccctttccaggacgaggt
tttgaagctcggcccgctcaagccgtgacgcccgacgtgtttgttgaacagaacggcgac
aacaagtgggttgttcgcgtgctcgacgagtacactccccgcctgcgaatcagcaagcat
taccagcagatccttagagacggcaccgaccagaagaccaaagaatacattaagcgaaaa
atcgactcggccaaatggctgatcgaaagcatcgagcaacgacacaacacgctcaagcgg
gtcgcgcaatccattgtcgataaacagaccgcatttctcgaatatggtcccgaagcgatc
gtcccgttgaaaatgcaggaaattgcagacgtcgtcaaagtccacgtgaccacggtctct
cgcgcagtcgacgacaagtggatccagacacctcgtggactttacccgctcaagaaattc
ttcggcggggggacggttacggagagcggcgaggaagttgcctgggacatcattcgcatc
aagctcaaggaaatcgtcgacaatgaagacaaaaacgatccactgagcgacgatgcactg
gtggatgagctggcaaagtttggttacaccctggcacgtcgaaccgtcaccaagtaccgc
aaagcacttgatattccttcttcacgtcagcgtcgcgcgtactga
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