Schlesneria sp. DSM 10557: QJS52_07730
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Entry
QJS52_07730 CDS
T10918
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
schl Schlesneria sp. DSM 10557
Pathway
schl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QJS52_07730 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schl03019
]
QJS52_07730 (pnp)
03016 Transfer RNA biogenesis [BR:
schl03016
]
QJS52_07730 (pnp)
Enzymes [BR:
schl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
QJS52_07730 (pnp)
Messenger RNA biogenesis [BR:
schl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
QJS52_07730 (pnp)
Transfer RNA biogenesis [BR:
schl03016
]
Prokaryotic type
tRNA degradation factors
QJS52_07730 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
KH_KhpA-B
KH_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
XFP05407
LinkDB
All DBs
Position
6067411..6069561
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AA seq
716 aa
AA seq
DB search
MKVVVEREFAGRTISLTTGEMAKQAAGAVLVQFGDTVVFVAAQNGPSRPGTDFFPLTCDY
RERSAAAGKFPGGFIKREGRPTQKEILTSRLTDRPIRPLFPDGYFEEVQVMSNVLSVDSE
NDPDVLSIIGASAALGLAPVPFNGPIAAVRVGLIGEELILMPTRTQMVDSRLDLIVAGSK
DSVLMIEGFAQQLPEAEMADAIMFAHRAIVELCALQDELKQKVGRADTPTPEVPVNPFDA
ALRDAAYNRLREAKVASVKADRRGATKELKDELFKSYFPDDAATTANGWTRDQFSAAFEN
LQHRVVRDLILEDKRLDGRSSQDLRAVSCQVGLLPIVHGSALFTRGETQSLATITLGTIR
DAQRVEGLFDEVQKRFMLDYNFPSYSVGECRPIRGPGRREIGHGALAERSVQSVIPSEEK
FPYTIRIISDIMESNGSSSMASVCSATLSLMDAGVPITQPVAGISIGLVKEKDKYVLLTD
IMGDEDHHGDMDFKVAGTQKGVTGIQLDLKIDGINEEIIRATLEQARKARIELLKTMLTS
IRRPRAEISTNAPRLLRTKIDPAKIGLLIGPGGKTIRAIQEETGATIDIADDGTVMIACS
KSDGAEDALARVEAMTEEIKVGRIYNGTVSSVKDFGAFIEIAPGKDGLCHISELSTGYVK
SVDEICKAGDKLQVKVIAIDDQNRVKLSRKAVLIEQGEGQEEAPPKPESEPEDAED
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagttgtagtagaacgcgaatttgcaggtagaacgatcagtctgacgactggcgag
atggccaaacaggcagccggagccgttttggtccagtttggcgatacggttgtgtttgtt
gcggctcagaatggtccttcgcgacctggtaccgacttcttcccgctgacctgcgactat
cgtgaacgatcggccgcggcagggaagttcccaggtggcttcatcaagcgagaaggtcgg
ccaacccagaaagaaatcctgaccagccgactcaccgatcgtcccattcgccccctgttc
cccgatgggtacttcgaagaagtgcaggtgatgtcgaatgtgctgtcggtcgactctgaa
aatgatcccgacgtactgtcgattatcggagcgagtgcagccctgggcctcgctccggtt
ccatttaatggcccgattgccgccgtgcgagtcggcctgatcggcgaagaactgatcctg
atgccgacccgtacccagatggtcgacagccgccttgacctgatcgtcgcaggcagcaag
gactcggtcctgatgatcgaagggttcgcacaacagttgccggaagccgaaatggccgac
gcaatcatgttcgctcaccgggccatcgtcgaactctgtgcgctgcaggacgaactgaag
cagaaggttggtcgcgctgacaccccgaccccggaagttcccgtcaacccgtttgacgcc
gctctgcgcgatgctgcttacaatcgcctgcgtgaagccaaagtggccagcgtcaaagca
gaccgtcgcggcgcgacgaaagaactcaaggacgaacttttcaagtcgtacttccctgac
gatgccgctacaaccgccaacggctggacccgcgatcagttcagcgccgccttcgaaaac
ctgcagcaccgcgtcgttcgcgatctgatccttgaagacaagcgtctcgacggtcgcagt
tctcaggacttgcgtgccgtttcctgtcaggtaggcctcctgccgatcgttcacggttca
gcactctttacccgtggtgaaacgcagtcgctggcaacgatcaccttgggaacgattcgc
gacgcacaacgggtcgaaggattgttcgacgaagtccagaagcggttcatgctggactac
aacttcccgtcctattcggttggtgaatgccgtccgatccgtggacccggtcgacgcgaa
atcggccatggtgccctggccgagcgatcggtgcagtcggtcatcccatcggaagagaag
ttcccttatacgatccgcatcatctccgacatcatggaatcgaacggcagcagttcgatg
gcgtcggtctgtagcgccacgctgtcgctgatggacgccggtgtccctatcacccagccc
gtcgcagggatctcgatcggtctggtcaaagagaaggacaagtacgttctgctgaccgac
atcatgggtgacgaagatcaccacggtgatatggacttcaaggtcgccggcacgcagaag
ggggtcacagggatccaactggacctcaagatcgacggcatcaatgaagaaatcatccgc
gcgacgctggaacaggctcgcaaggcccgtatcgagttgctcaagacgatgttgacttcg
attcgtcgccctcgagccgagatctcgacgaacgctcctcgactgctccgcaccaagatc
gatcccgccaagatcggcctgctgattggtcccggcggcaagacgatccgcgcgattcag
gaagaaaccggagccacaatcgatatcgccgacgatgggacggtgatgatcgcctgctcg
aagagcgacggagcagaagatgctctggcacgcgtcgaagcgatgaccgaagaaatcaag
gttggtcgcatctacaacggaaccgtcagttcggtcaaagacttcggtgcgttcatcgaa
atcgcccccggcaaagacggactgtgtcacatcagcgaactgtcgacaggctatgtgaag
tcggtcgatgaaatctgcaaggcaggggacaagttgcaggtgaaggtaatcgccatcgat
gaccagaaccgcgtcaagttgtctcgcaaagcggtgctgattgagcagggtgaaggccag
gaagaggctccaccaaagcccgaatcggaacccgaagacgccgaagactaa
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