Schlesneria sp. DSM 10557: QJS52_08250
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Entry
QJS52_08250 CDS
T10918
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
schl Schlesneria sp. DSM 10557
Pathway
schl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QJS52_08250 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schl03019
]
QJS52_08250 (recQ)
03400 DNA repair and recombination proteins [BR:
schl03400
]
QJS52_08250 (recQ)
Enzymes [BR:
schl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QJS52_08250 (recQ)
Messenger RNA biogenesis [BR:
schl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QJS52_08250 (recQ)
DNA repair and recombination proteins [BR:
schl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
QJS52_08250 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
ResIII
MksE
HTH_23
Motif
Other DBs
NCBI-ProteinID:
XFP05510
LinkDB
All DBs
Position
complement(6212573..6214786)
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AA seq
737 aa
AA seq
DB search
MTNVTDTMSALRDVLQKYWGYDSFRPLQAEAMRTIIERRDSVVVLPTGGGKSICFQAPAV
AMPGLAVVVSPLISLMKDQVDALTEYGIPAACVNSSMTNAERFKVADSIRRGELKLLYVA
PERLCSDKMLDFLETSQVSFFAIDEAHCISAWGHDFRPEYRMLQQLRTRFPGIGVHAFTA
TATETVRQDISDQLGLRDPEWLIGSFDRPNLIYRVLKKGDVLKQVRSVIDAHPEESGIVY
CISRREVDELAQSLKQAGYKTRPYHAGLSDEDRNRHQDEFLNDKTQIIVATVAFGMGIDK
SNIRYVIHTGAPKSLEHYQQETGRAGRDGLEAECWLLWSSANFIIWRKMQEELPPPAKAQ
ALESLKGIERFCTGVSCRHKVLVEHFNQAFESFNCRACDVCLDQLDLVADPLVMGQKILS
CVVRVNESYGADYVAQVLVGSRDARILANEHDQLSTYGLLKSERKEAVRDWIEQLASQGF
LEREGEYNTLKVTDAGWKLLKGQATLKLLQPAKKKSGSGSGSSSKVEAASWEGVDRELFD
ELRGLRRRIAEGHGVAPFVIFADTTLRDLARRRPTNLANFRLVHGVGDKKTADFGSLFTD
AIREYCDRHQVARDLDTPGSTTLVPRVTQSTEAVTLSPTKQLAFDLFRQGKSVEDVAALT
ERTSSTVSDYLIEFISTIQQCDPAPWVNESTFEKVRAAVSRVGTDRLRPIFEALDQQVQY
EQIKVALACIKNLPPVK
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatgttacggatacgatgtcggcgctgagagatgttctgcagaaatactgggga
tacgattcgtttcggccactgcaggcggaagcgatgcggacgatcatcgagcggcgagac
tcggtcgttgtcctgccgacagggggcggaaagtcgatctgttttcaggctccggcggtg
gcgatgcccggattggcggtcgttgtttcgccgctgatctcgctgatgaaagatcaggtc
gatgcactgacggagtatggtatccccgcggcttgcgtcaacagttcaatgaccaacgcg
gaacggttcaaggtggctgattccattcggcgaggggagttgaagctgctgtatgtcgcc
cccgagcggctgtgcagcgacaagatgctcgacttccttgagaccagtcaggtttcgttc
ttcgccatcgatgaagcacactgtatcagcgcctgggggcacgactttcggcctgaatat
cggatgctgcagcaacttcgcacgcggttccccgggatcggcgtccatgccttcactgcc
actgcaacagaaaccgtgcggcaggatatttcagaccagttgggactgcgtgatccggaa
tggctgattggttcatttgatcgtcccaacctgatctaccgggtgctgaaaaaaggggat
gtcctgaagcaggtgcgtagcgtgattgatgcacatcctgaagaatcggggattgtctac
tgtatctcgcgccgtgaagtggacgaactggcacagtcgttgaagcaggcgggatacaag
acgcggccctaccatgcggggttgtcggacgaagatcgcaatcggcatcaggacgaattt
ctcaacgacaagacccaaattattgtcgccacggttgccttcgggatggggatcgacaag
tccaatatcaggtacgtgattcacacaggggcgccgaagtcgctcgaacactatcagcag
gagacagggcgtgcaggccgtgacggcctggaagccgaatgctggctcctctggtcgtcc
gcgaattttattatctggcgaaagatgcaggaggaacttcccccccctgccaaagcgcag
gccctggaaagcctgaaagggatcgaacgcttctgcacgggggtgtcgtgccgccacaag
gtgctggtggagcatttcaatcaggcgtttgaatcgttcaactgccgtgcgtgtgatgtt
tgccttgatcagcttgatctggtggcggaccccttggtgatggggcagaagattctttcc
tgtgttgtgcgggtgaatgaaagttacggggcggactacgtggcacaggtcctggtcgga
tcacgagatgcccgcattctggcgaatgagcacgatcagctttcgacgtacggattgctg
aaatcagagaggaaagaggctgtccgcgactggattgagcagttagcctcgcagggattt
ctggagcgagagggggaatacaacacgctgaaggtgaccgacgcgggctggaagcttttg
aaggggcaggccacgctcaagctgctgcagccagcgaagaaaaaatcgggatcgggatcg
ggaagttcgtccaaagtcgaagcggcatcgtgggaaggtgttgatcgtgaactgttcgac
gaactgcgggggcttcgtcggcggattgcagaaggtcacggcgtcgctccgtttgtgatc
ttcgcggatacgacccttcgtgacctggcccggcggcgaccaaccaacctggcaaacttt
cgacttgtgcacggggtcggggataaaaaaacggctgactttgggagtttgttcaccgac
gccattcgtgaatattgcgatcggcaccaggtggcgcgtgatctggacactcccggaagt
acgactctggttccacgtgtcacccaatccaccgaagctgtgacgttgtcaccgacgaag
caactggccttcgacctcttccgccaaggcaagtcggtggaagacgttgcagcattgacc
gagcgcacatcgtcgacggtctcggattatctgatcgaatttatcagtacgattcagcag
tgtgaccccgcaccctgggtgaatgagtccacttttgaaaaggtccgggcagcggtttcc
cgagtcggaacggatcgactgagaccgatttttgaggctttggaccagcaagtgcagtac
gagcagatcaaggtggccctggcttgtatcaagaacctccctccggtcaaatag
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