Schlesneria sp. DSM 10557: QJS52_08740
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Entry
QJS52_08740 CDS
T10918
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
schl Schlesneria sp. DSM 10557
Brite
KEGG Orthology (KO) [BR:
schl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
schl03009
]
QJS52_08740 (rimO)
Enzymes [BR:
schl01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
QJS52_08740 (rimO)
Ribosome biogenesis [BR:
schl03009
]
Prokaryotic type
ribosomal protein modification factors
QJS52_08740 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
XFP05607
LinkDB
All DBs
Position
complement(6366079..6367497)
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AA seq
472 aa
AA seq
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MHLPIISSVDPVPSFQPEDGPPSIAKGTYAFVSLGCPKNLVDSEKMLGTLALDGYSLVSE
PDGADFVIVNTCGFIDSSRAESKAVIREMLDLKRAGKTKGVIVAGCLPQRLGPALLDELP
EIDHIVGVFGRDEINRVADHLIGMAREQRELFRPAPLKAMDDRARLRITPQHYAYLKISE
GCDRTCTFCSIPKMRGKHITKPIEMVIAEAQELAKDGVRELNLVAQDTTYYGLDLYGKVR
LADLIKELDQVDGVDWIRLMYLYPIHFTDELIDAINNSPKVIPYLDMPLQHINDQVLRRM
QRRVNRSQTEELVRKLRDRVDGLVMRTTFVVGFPGETDAQFEELKQFVEEAQFERMGVFP
YSFEPDTPATKLDGHLPEDVKNARRDELMAIQQQIAFEYGDSLVGSEIDVLIDEQLEDGI
WVGRGYMDAPEIDGAVFVSGEDLQPGMFVPVEIVERKDYDLVGVAVDDSEQP
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcatttgccgattatctcgtccgttgatcccgttccctcgtttcagcccgaggatggc
ccgccatcgatcgcgaaggggacctacgccttcgtgtcgctgggatgtcccaaaaacctg
gtcgacagcgagaaaatgctgggaaccttggctctcgacggttactcgctcgtcagcgaa
ccggacggagcagacttcgtcattgtcaatacctgcggattcatcgacagttcccgtgcc
gaatccaaggctgtgatccgtgaaatgctcgatctgaagcgagcaggcaaaaccaagggg
gtcatcgtggcaggctgtctgcctcaacgactgggccccgcgctgctcgacgaactaccc
gaaatcgatcacatcgtcggggtcttcggacgtgacgaaattaatcgtgtcgccgatcac
ctgatcggcatggcacgcgaacagcgggaacttttccgtcctgctcctctgaaagcgatg
gatgacagggctcgtctgcgaatcacgccgcagcactatgcctacctgaagatttccgaa
gggtgtgaccgcacctgcacattctgttcgatcccgaagatgcgcggaaagcacatcaca
aagccgatcgaaatggtaatcgcagaagcgcaggaactggccaaagatggtgttcgcgaa
ctgaatctcgtcgcccaggacaccacgtactacggactggatctctacggcaaagtccga
ctggcggatctgatcaaggaactggatcaggtcgacggagtcgactggatccgcttgatg
tatctgtatccgattcatttcaccgatgaactgatcgacgccatcaacaattcaccgaaa
gtgataccttatctcgatatgcccttgcagcatatcaatgatcaggtgttgcgacggatg
cagcgtcgagtcaatcgcagccagacggaagaactggtgcgcaagctgcgtgatcgcgtt
gacggtctggtcatgcgaacgaccttcgttgtcggtttccccggtgagaccgatgcccag
ttcgaagaactgaagcagtttgtcgaagaagcccagtttgaacgaatgggcgtcttccct
tactcattcgaacctgatacgcccgccacgaagctggacgggcacctacctgaagacgtt
aagaacgctcgtcgcgatgaactgatggcgattcagcagcagatcgcgtttgaatacggc
gattcactcgtcggcagcgaaatcgatgtgctgattgacgagcaacttgaagatgggatc
tgggtcggtcgcggttatatggacgctccggaaatcgatggagctgtcttcgtgagtgga
gaagaccttcaaccgggcatgtttgttcccgtcgaaatcgtcgaacgcaaagactatgac
cttgttggggtcgccgtcgacgattccgaacagccctga
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