Schlesneria sp. DSM 10557: QJS52_11880
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Entry
QJS52_11880 CDS
T10918
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
schl Schlesneria sp. DSM 10557
Pathway
schl03030
DNA replication
schl03430
Mismatch repair
schl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
schl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
QJS52_11880 (holA)
03430 Mismatch repair
QJS52_11880 (holA)
03440 Homologous recombination
QJS52_11880 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schl03032
]
QJS52_11880 (holA)
03400 DNA repair and recombination proteins [BR:
schl03400
]
QJS52_11880 (holA)
Enzymes [BR:
schl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
QJS52_11880 (holA)
DNA replication proteins [BR:
schl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
QJS52_11880 (holA)
DNA repair and recombination proteins [BR:
schl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
QJS52_11880 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
XFP06214
LinkDB
All DBs
Position
193538..194533
Genome browser
AA seq
331 aa
AA seq
DB search
MHAVEFLKQSSGDIAPVVVLSGGQRHLKQAAMANLRKRVIDDDETCLTRFPAKEATLQAV
SDELHTVSMWGDRRLVVVDDADEFVTKNRAGLEKLVEKPARKSVLALVLDSFPKTTKLYK
LVAAKGLEIECSELKGPQLQKWLQETAKETYGQSISRDTAALLVELVGDELGMLDSELAK
LASYVGSKGKIEIEDVKSLVGGWRTETTWAMTDATRDNDLDFALTALDQLLTSGEPPMKL
LGGISYTFKKYAVATDLSRTIALDQALRQAGVFPMAVNAGQSYLRRLGRTKAEQILQRLV
QVDSGLKGANPLPERIQLERLLVELSGHDLS
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgcatgctgttgagtttctcaaacaatcctccggtgacatcgctcctgtcgtcgtcctg
tcgggtggacagcggcatctgaaacaagccgcgatggcgaacttacggaagcgcgtaatc
gacgatgacgagacctgcctgacccgatttcccgcgaaagaagcgacactgcaggccgtt
tcggacgaacttcataccgtctcgatgtggggtgatcgccgcctggtagtcgtggatgac
gcagacgaattcgtcaccaagaatcgtgcaggtctggagaagctggtcgaaaagccggcc
agaaaatccgttctggctctcgttctcgactctttcccaaagaccacgaagctttacaaa
ctggtcgctgcgaaggggctggagatcgagtgttccgagctgaaaggcccgcaactgcaa
aaatggctccaggagacggccaaggagacgtacggccaatcgattagccgggacaccgcc
gcattgctggtcgaactggtgggcgacgaactgggaatgctggattccgagctggcgaag
ctggcgtcgtatgtcgggtcgaaaggaaagatcgaaatcgaggatgtcaaatcgctcgtc
ggcggatggcggaccgagacgacctgggccatgaccgacgcgacccgcgacaatgatctc
gatttcgccctgaccgcactcgatcagttgctcacgtcaggtgaaccacccatgaagctg
ctggggggaatctcgtacaccttcaaaaagtacgccgtcgcaaccgatctttcacggacg
atcgctctcgatcaggcgctgcgacaagcaggggtctttccgatggccgtgaatgccggt
cagtcctaccttcgccgattgggccgaacgaaggcagagcagatcctgcagcgactggtc
caggttgattcgggtctgaagggcgcaaaccctcttcccgagcggattcagctcgagcgt
ctgctggtcgagctgtccgggcatgacctttcctga
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