Schlesneria sp. DSM 10557: QJS52_18325
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Entry
QJS52_18325 CDS
T10918
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
schl Schlesneria sp. DSM 10557
Pathway
schl03020
RNA polymerase
Brite
Enzymes [BR:
schl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QJS52_18325 (rpoC)
Transcription machinery [BR:
schl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QJS52_18325 (rpoC)
DNA repair and recombination proteins [BR:
schl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QJS52_18325 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XFP02611
LinkDB
All DBs
Position
1955373..1959650
Genome browser
AA seq
1425 aa
AA seq
DB search
MSVGETTYDRVNEYSAIKIGLASPQDIRGWSFGEVKKPETINYRTYRPERDGLFCERIFG
PEKDWECACGKYRGMKYKGMICDRCGVKVTHSRVRRKRMGHIELAAPVVHIWFFKSMPSR
LGALLNVKTTALEKVVYFQDYIVLDPGDTPLRKGQLLTEEEARQARSKYGEGTFDIEMGA
DAVKKLLMSLNLVELSAQLRVELKKTTSQQKKKELIKRLKISEALRDSDNKPEWMVLDCV
PVIPPDLRPLVLLDSGNFATSDLNDLYRRIINRNNRLKKLVDLNAPEVIVRNEKRMLQQS
VDALFDNNRCKRPVLGSSNRPLKSLTDMIKGKQGRFRENLLGKRVDYSARSVIVVGPNLE
LHQCGLPKKIALELYQPFIIRRLKELGHADTIKSAKRMLERRDEEVWDILEEVITNHPVL
LNRAPTLHRMGIQAFEPILVEGNAIRIHPLVCKGFNADFDGDQMAVHLPLSIEAQVEATT
LMMSTNNIFSPSNGAPIISPSQDIVMGCYYLTLKKEDRPGHGMIFASTQEVHTAHLLGKV
TLHTLIKVRLPKDKRVKGEGSDDYSLGGIVETSVGRIMFNDILPPKMAYYNQTMKNKDLA
NVISDCYLELGRRETIKLLDRMKEVGFRESTRSGLSFAASDLKTPDNKEKVILAAESTVL
KKQKLYEKGVITAKERYEQVLDTWTHASDLIKIAMMDAFKNDTRDNGAYVNPVYLMADSG
ARGGQEQIRQLAGMRGLMAKPSGEIIETPIKANFREGLSVLEYFSSTHGARKGLADTALK
TADSGYLTRKLADICQNMVVTTHDCGTTKGITRGVVYRGEKVEVSLADAIRGRVSRQNIV
NPITDEVIVRENEMITVDISRKIEELGLEKIQVRSPMTCESDLGMCRLCYGMDLSTGSLV
EEGLAVGIIAAQSIGEPGTQLTMRTFHIGGVAIKDIQESEIKSRRQGRVRLARIRSVVNA
DGKSVVLGRNGELLVVDSKERELERYTVPTGAVLQVGENDTVEIGQVLCTWDQHSIPILC
EVGGRVRFEDLVEGQSIRSEKDPSGNIRKTVIEHKGELHPQIVLEDSTGKILDFYYLPER
ASIEVVEGQQISAGTVLAKNPRETSGTQDITGGLPRVTELFEARKPKEPAIIAEIDGEIE
LVAEKKRGKRIIIVRGADGTEKEHVIPHGKQLLVHAKDQVRAGDALVRGPLVPHDILRVS
GEEAVQQYLLHEIQTVYRSQRVVIDDKHIEIVLSQMLRKLKVEDVGDTTMLPGVLVDRFE
FRKINQKLQSSARITDPGDSEFQEGDVVPLETIEQVNREIEASGGPLVKFTKPRPANAST
QLLGITKAAVQSDSFISAASFQETTKVLTEAAIAGKIDNLVGLKENVILGHLIPAGTGFQ
LHQQSEVKIKPEALAEIYAERDRIMAQRANLLNEPDLSNSAADVK
NT seq
4278 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgtcggtgaaacaacatacgatcgagtgaacgaatactcggcaattaaaattggc
ttggcgagtcctcaagacattcgcggttggtcgttcggtgaagtgaagaagccagaaacg
atcaactaccgcacgtaccgtccggaacgggacggtctgttctgcgaacggatctttgga
cctgaaaaggactgggaatgtgcctgcggtaaataccgtgggatgaaatacaagggcatg
atctgtgaccgctgtggcgtgaaagtgacgcacagccgggttcgccgtaagcgaatgggc
catattgaactcgccgcccctgtcgttcatatctggttcttcaaatcaatgcccagccga
ctgggggcgttgctgaacgtcaaaacgactgctctcgagaaagtcgtctatttccaggac
tacatcgttctggacccgggtgacactcccctgcgcaaggggcagttgctgacggaagag
gaagcacggcaggctcggtcgaagtacggcgaaggtacgttcgatatcgagatgggggcc
gatgcagtcaagaaactgctgatgagcctcaatctggttgagttgtccgcgcagttgcgt
gtcgaactcaagaaaaccaccagtcagcagaagaagaaggagctgatcaagcggctgaag
atctctgaagccctgcgcgacagtgacaacaagcccgagtggatggtgctggattgcgtt
cctgtcattccacccgatcttcgtccgctggttctgctggattccggtaattttgcaacc
agcgatttgaacgatctttatcgtcgaatcatcaatcgtaacaaccgtctgaagaagctg
gtcgatctcaacgcgcccgaagtgatcgtgcgcaacgagaagcgaatgcttcagcagtcg
gtcgatgcgttgttcgacaacaatcgttgtaagcgaccagtcctgggttcatcgaaccgt
ccgctgaaatcgctgacggacatgatcaaaggtaagcagggtcgattccgtgaaaacctg
ctcggtaaacgcgtcgactattcggcacgaagcgtgatcgtcgtggggccgaatctcgag
ctgcatcagtgtggtctgccaaagaagatcgcgctggaactgtatcagcctttcatcatt
cggcgactgaaagaactgggtcatgcagatacgatcaagagtgcaaagcgcatgcttgaa
cgtcgcgacgaagaggtttgggatattctcgaagaggtcatcaccaaccatccagtgctg
ctgaaccgggcccccaccctgcaccgtatgggtatccaggcgttcgagccgatcctggtg
gaaggtaacgccattcggattcatccgctggtctgtaagggattcaacgcggacttcgac
ggcgatcagatggcagtccacctgccactctcgatcgaagctcaggtcgaagccacgacg
ctgatgatgtcgacgaacaacatcttcagtccttccaacggtgcgccgatcatcagcccc
tcgcaagatatcgtgatgggttgctactacttgactttgaagaaggaagaccgtcctggt
cacgggatgatcttcgcttcgacccaggaagtgcataccgctcacctgctgggtaaggtc
acgctgcacacgttgatcaaggttcgtttgccgaaggataaacgcgtcaagggcgaaggg
tcggacgattattcactcggcgggatcgtcgagacgagcgtcggtcggatcatgttcaac
gacatcctcccgccgaagatggcgtactacaaccagaccatgaagaacaaggatctggcg
aacgttatctctgactgctacctcgagctgggacgtcgcgagacgatcaagctgctggac
cggatgaaggaagtcgggttccgtgaatcgactcgcagcggtctttcattcgccgccagc
gatttgaagacgccggacaacaaggaaaaggtgattctggctgccgaatcgaccgttctc
aagaagcagaagctgtatgagaagggtgtgattaccgcgaaagagcgttacgagcaggtt
ttggatacctggacgcacgccagcgatctgatcaagatcgcgatgatggatgcgttcaag
aacgacacccgcgataacggcgcttacgtcaacccggtttacctgatggcggactcgggt
gctcgagggggtcaggaacagattcgtcagctcgctggtatgcgaggtttgatggccaag
ccaagcggcgagatcatcgaaaccccgattaaggcgaacttccgtgaaggtctttcagta
cttgagtacttcagctctacgcacggtgcccgtaagggattggccgataccgcgctcaag
acggcagacagcggttacctcacccgtaagctggcagatatctgtcagaacatggttgtg
acgactcatgattgtggtacgaccaaggggatcacccgtggggtcgtctatcgcggtgaa
aaggtggaagtcagtctggccgacgccatccgcggtcgggtcagccgacagaacatcgtc
aatccgattactgacgaagtgattgttcgtgaaaacgaaatgatcaccgtcgacatctcg
cgaaagatcgaagaactcggtcttgagaagattcaggtccgcagcccgatgacctgtgaa
tcggatctggggatgtgccgtctgtgttacgggatggacttgtccaccggctcgctggtc
gaagaaggcttggctgtcggtatcatcgcggctcaaagtatcggtgagcccggtactcag
ctgacgatgcgtaccttccacatcggtggggtggcaatcaaggacatccaggaaagcgaa
atcaagtcccgtcgtcaggggcgtgtccgcctcgctcgtatccgcagcgtggtgaacgct
gatggcaagagcgtggtgctgggacgtaacggcgagctgcttgttgttgactccaaagag
cgcgagctggagcgttacaccgttcccaccggtgctgtgctgcaggtcggtgagaacgac
acggtcgaaatcgggcaggtgctgtgtacctgggatcaacactccattccgatcctctgc
gaagtcggcggacgggttcgcttcgaagacctcgtcgaaggtcaatccattcggtctgaa
aaggatccgagcggtaacattcgtaagacggtcatcgagcacaaaggcgaactgcatccg
cagatcgtgctggaagattcgaccggcaagatcctcgacttctactacctgcccgaacgt
gcaagtatcgaagttgtcgaaggtcagcagatctccgctggtacagttctggcaaagaac
ccccgtgaaacgtcgggtactcaggacatcaccggtggtcttccgcgagtcaccgaactg
ttcgaagctcgaaagccgaaagagcccgcgatcatcgccgagatcgacggtgaaattgag
ctcgttgccgagaagaagcgtggcaagcgaatcatcatcgttcgcggagcggatggaacc
gaaaaggaacacgtcattcctcacggcaagcagttgctcgtgcatgcgaaagaccaggtc
cgtgcgggtgacgcactcgtccggggtccactcgtgccgcacgatattctgcgagtcagt
ggtgaagaggctgtccagcagtacctgcttcacgaaattcaaacggtgtatcgttcacaa
cgcgtggtaatcgacgacaagcacattgaaatcgtcttgtcgcagatgctccgcaagttg
aaagtggaagacgttggcgacacaaccatgttgccaggcgtgctggtggatcgattcgaa
ttccgaaagatcaaccagaagctgcagtccagcgcacggatcaccgaccctggcgattcg
gaattccaggaaggggacgtcgttcccttggagaccatcgagcaggtcaaccgggaaatc
gaagcgtcgggtgggccgctggtgaaattcaccaagccgcgtcctgcaaacgccagtact
cagttgctggggattaccaaggcggccgtccagagcgacagctttatttctgctgccagt
ttccaggagacgactaaggtattgaccgaagcggcgatcgccggaaagatcgataacctg
gttggcttgaaggagaacgtcatcctcgggcacctgattccggccggtaccggtttccag
ttgcatcagcaatcggaagtcaaaatcaagccggaagcgttggcggaaatttacgccgag
cgagacagaatcatggcccagcgagcgaatctgctcaacgagcctgacttgtcaaacagt
gctgctgatgtgaagtaa
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