Schlesneria sp. DSM 10557: QJS52_18465
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Entry
QJS52_18465 CDS
T10918
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
schl Schlesneria sp. DSM 10557
Pathway
schl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
schl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
QJS52_18465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
schl03021
]
QJS52_18465
03400 DNA repair and recombination proteins [BR:
schl03400
]
QJS52_18465
Enzymes [BR:
schl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
QJS52_18465
Transcription machinery [BR:
schl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
QJS52_18465
DNA repair and recombination proteins [BR:
schl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
QJS52_18465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HHH_5
HHH_XRCC3_RpoA
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
XFP02635
LinkDB
All DBs
Position
1975977..1976996
Genome browser
AA seq
339 aa
AA seq
DB search
MRIRWRGLELPNRVVTEKETLTSTYGKFVIEPFERGFGATIGNSLRRILLSSLEGSSVTR
IKIQGVQHEFTTIPGIVEDVTDICLNLKSVVVKNHALVPKTLRIERHERGVVTAADIIVD
DQVEVYNKDLVIATMTDDVSLNIEIQVENGRGYSPVSEQPEHQNEVGVIPIDAIFSPITR
VRYKIEETRVGQRTNYDRLILEIWTNGTVTPEMALVESAKILRKHLNPIITYREPGPETF
PDSGLRNMHESTGYAPVDLELEERLSRSLAELNLSVRATNCLESEGINTVRDLVTRTEDQ
LLQVRNFGDTTLQEVRERLTSINLRLGMRLPQSMQQRDR
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgagaattcgctggcgcggccttgaattgccgaatcgggtcgtcaccgagaaagagacc
ctgacgagcacgtacggcaaatttgtgatcgagccattcgagcgtggctttggtgcgacg
atcggaaacagtttgcgacggattttgctgtcgagcctggaaggtagttcggtcacacgg
atcaagattcagggtgtccagcacgaattcaccaccatccccggtatcgttgaagacgtc
acggatatctgtctgaatctgaagtcggttgttgttaagaatcacgctttggttccaaag
acgttgcgtatcgagcgtcatgaacgtggcgtggtgaccgcggcggatatcattgttgat
gaccaagttgaagtctacaacaaggatttggtcatcgcgacgatgactgacgacgtctcg
ctgaacatcgagattcaggttgagaatggtcgcggttattccccggtctcggaacagccc
gagcatcagaatgaagttggggtgatccctatcgacgccattttctcgccgatcacgcgt
gtgcgttacaagatcgaagagacgcgcgttgggcagcggacgaactatgaccgactgatt
cttgagatctggaccaacgggacggtcacacctgagatggctttggttgagtctgccaag
attctgcgtaagcatctcaatccgatcatcacttatcgtgagcctggtcccgaaacgttc
ccggacagcggcctgcgtaatatgcatgagtcgacgggatacgctccggttgatctggag
ttggaagaacggttgtcacgtagtttggctgaactgaatttgtcggtgcgggctacgaac
tgtctcgagtccgaagggatcaataccgttcgcgacctggtgacaaggacggaagaccag
ttgctgcaggtccgcaatttcggtgacacgacattgcaggaagtgcgtgagcggttgacg
tcgattaacttgcgtctggggatgcgattgccacaatcgatgcagcagcgcgatcgctag
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