Schlesneria sp. DSM 10557: QJS52_19055
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Entry
QJS52_19055 CDS
T10918
Name
(GenBank) 3'-5' exoribonuclease YhaM family protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
schl Schlesneria sp. DSM 10557
Brite
KEGG Orthology (KO) [BR:
schl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schl03019
]
QJS52_19055
Messenger RNA biogenesis [BR:
schl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QJS52_19055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
XFP02752
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All DBs
Position
complement(2146975..2147946)
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AA seq
323 aa
AA seq
DB search
MSRRFVTDLNDGEIVDEVYLVSDKQLRANRNAALYLSVDLRDKSGMINGRMWNVSEDSCS
EIQTGAYVRVRGKVQLFQGILQLILTHCDPVSASLVDPVDFEKMSSVKVEQLLEQLRTTL
LGFENFHLRTLMEFFLVDETIMQALAETPAGVKAHHAYAGGLVEHVVTLLKSAEKMCEVY
PDIDLELLQAGVFLHDIGKTRELSCAAGFSYTDEGQLLGHLMIGVEMLTAKILKVVELTN
EPFPQELEWRLKHMILSHHGSYEFGSPRLPMTPEAILLHVIDNLDAKLHEFTRAIQDDPN
GSSHWTLFIPRLDRKIFKGIKRI
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgccggtttgtaactgatcttaatgacggcgaaatcgtggacgaagtctatctt
gtgtccgacaagcaacttcgagctaaccgtaacgcagcactgtacttgtccgtcgatctc
cgtgacaaatcggggatgatcaatggccggatgtggaacgtctcggaagattcctgttcc
gaaattcaaactggtgcctacgttcgcgtgcggggaaaagtccagctcttccaggggatc
ctgcaactcattctgactcactgcgatcccgtttctgcgagccttgtcgatccggtggac
tttgaaaaaatgtcctctgtgaaggtcgaacagctgctggaacagttgcggacgacgctc
ttaggcttcgaaaacttccatctgcgaacattgatggaatttttcctggtcgatgaaacg
attatgcaggcactggccgagacacccgccggtgtgaaggcccatcacgcgtacgccggt
ggactggtggaacacgtggtcacgctgctgaaatcagccgagaagatgtgcgaagtttat
ccagacattgatctggaactgttacaggcgggggtcttcctgcacgacattggcaaaacg
cgtgagctttcgtgcgctgccggtttcagctacacggatgaaggtcagctgctggggcac
ctcatgatcggtgtcgagatgttgaccgcaaagatccttaaggtggttgagctgaccaac
gaaccattcccgcaggaactggaatggcgattgaagcatatgattctgagtcaccatggt
tcgtatgaatttggaagcccgcggttgccgatgacaccagaggcgatcctgctgcatgtc
attgataatctggatgccaaattgcacgagtttaccagagcgattcaagacgatccgaac
ggcagctcgcattggacactgttcattccgcgactggatcgtaagattttcaagggaatc
aagcgaatttga
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