Schlesneria sp. DSM 10557: QJS52_20280
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Entry
QJS52_20280 CDS
T10918
Name
(GenBank) HU family DNA-binding protein
KO
K05788
integration host factor subunit beta
Organism
schl Schlesneria sp. DSM 10557
Brite
KEGG Orthology (KO) [BR:
schl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schl03032
]
QJS52_20280
03036 Chromosome and associated proteins [BR:
schl03036
]
QJS52_20280
03400 DNA repair and recombination proteins [BR:
schl03400
]
QJS52_20280
DNA replication proteins [BR:
schl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
QJS52_20280
Chromosome and associated proteins [BR:
schl03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
QJS52_20280
DNA repair and recombination proteins [BR:
schl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
QJS52_20280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
RNA_pol_Rpc34
Glyco_trans_1_2
HU-CCDC81_bac_2
Mnd1
FliG_C
Motif
Other DBs
NCBI-ProteinID:
XFP02994
LinkDB
All DBs
Position
2517982..2518371
Genome browser
AA seq
129 aa
AA seq
DB search
MTKKEIVKEISEALGMTQLKTKEIVQKTFDAIVKTLVADGRIELRNFGVFEVKKRAARKA
RNPRTGDKVFVPEKFVVTFKPGKEMEEKVRQLEMEAAAKAAIESADHHQLNGAPEPVTIA
PELPTSLPE
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagaaagaaattgtcaaagagatctcagaagccctggggatgactcagctcaag
acgaaagagatcgtccagaaaacgttcgatgcgatcgtcaagacgctcgtcgcagacggg
cgaattgagctgcggaacttcggagtttttgaagtcaaaaagcgtgcggcccggaaggca
cggaatccacgaactggcgataaggtcttcgtacctgagaagttcgtggtgacgttcaag
ccaggcaaagagatggaggaaaaagtccgtcaattggagatggaggctgcggccaaagcg
gccattgaatcagccgaccatcaccagctcaacggagcgcccgaaccagtcacgatcgcc
ccggaactccccaccagcctccctgaatga
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integrated database retrieval system
