Schlesneria sp. DSM 10557: QJS52_22685
Help
Entry
QJS52_22685 CDS
T10918
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
schl Schlesneria sp. DSM 10557
Pathway
schl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
schl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QJS52_22685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
schl03019
]
QJS52_22685
03009 Ribosome biogenesis [BR:
schl03009
]
QJS52_22685
Enzymes [BR:
schl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QJS52_22685
Messenger RNA biogenesis [BR:
schl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QJS52_22685
Ribosome biogenesis [BR:
schl03009
]
Prokaryotic type
rRNA helicases
QJS52_22685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
AAA_19
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
XFP03460
LinkDB
All DBs
Position
complement(3174026..3175804)
Genome browser
AA seq
592 aa
AA seq
DB search
MTHKLFSDLGLSPDLLKSIERMGFEQASPIQAEAIPQILTGRDVIGQSQTGSGKTAAFGI
PAVEMADPTNRDVQIVMMCPTRELASQVAEEISKLAHFKKGIRELPIFGGQSYEHQFRGL
KAGPQIVIGTPGRLIDHIKQGTLKLSGVKMIVLDEADRMLDMGFRDDIEKILEAIPSERQ
IVLFSATLPPPIRKIIERFTKDPITVRIEATAMSVPAIEQSYVEVDYRSKTEVLCRLLDL
HDVRYGLVFGFTKIQVDTLTEALTARGYSCDKLHGDMTQPMRERTMKRFRERKIDLLVAT
DVAARGLDVDDLEIVFNYELPHDAEDYVHRIGRTGRAGKSGKAISLVSGREFGRLQQIIR
FTKAKINRVSVPRLEELELKHASRLVESLHNTIQSGEFKPQDKLLEDLIEAGHAPGEIIS
ALMHMLAGESNRAPERIAEDDPRPPRRSHRDHPFDQRDQRGPRGDRDDGPPRMTRPREST
GRGQYDGPPSRVDDSGVWIKFNVGDNAGVSPGDFVGCIANEAGVPRTVIGNIQILQTVSF
VQVAAEAAEQILGAVQGVRLRGRRVQAMPGTPPRRDFRPGRDEGPNRRGNRN
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgacacacaaacttttctccgatctgggcctctcgcccgaccttctcaaatccatcgag
cgaatgggttttgaacaggcctcaccgattcaggctgaggcgatcccacagattctgacc
ggccgggacgtgatcggccaatctcaaaccggttccggtaaaaccgctgccttcggtatc
ccggctgtggaaatggccgaccccaccaatcgtgacgtgcagatcgtgatgatgtgcccg
actcgcgaactggcctcgcaggttgccgaagaaatctcgaaactcgcccacttcaaaaag
ggaatccgcgaactgccgatctttggcggacagagttacgaacatcagtttcgcggactg
aaagcgggcccgcagatcgtcatcgggacacccggccgactgatcgaccatatcaagcaa
ggcacgctgaagctgagcggcgtcaagatgatcgtcctcgacgaagccgatcgcatgctc
gacatgggcttccgcgacgacatcgagaagatcctcgaagcgatccccagcgagcgccag
atcgtcctcttctcagcaaccctgccccctccgatccgcaaaatcatcgaacgctttacg
aaggacccgattacggtccggatcgaagcaaccgcgatgagcgtcccggcgatcgaacag
tcctacgtcgaagtcgactaccgatccaagactgaggtactctgtcgcctgctcgacctg
cacgatgtccgctacggactcgtcttcggattcacaaagatccaggtggatacgcttacc
gaggcgctgacggcgcgcggttacagttgcgacaaactgcatggcgacatgacccagccg
atgcgtgaacgaaccatgaagcggttccgtgaacgtaaaatcgacttgctcgttgcgacc
gacgtcgcagcccgcggcctggatgtggacgatcttgaaatcgtattcaattacgagctg
ccgcatgatgccgaagactacgtacaccgcatcggccggacgggacgcgccggtaaaagc
ggcaaggccatcagcctggtcagtggccgcgaattcggacggttgcagcagatcattcgc
ttcaccaaggcgaagatcaacagagtctcagtcccgcgacttgaagagctcgagctgaaa
catgccagtcgactcgtcgagtccctgcataacacgatccagtcgggcgagttcaagccg
caggacaaactgctggaagacctgatcgaagcagggcacgctcccggcgaaatcatctcc
gccctgatgcacatgctggcgggcgaaagcaaccgagcccccgaacggatcgccgaagac
gacccgcgtcctccccgtcgatcccaccgcgatcatccgttcgatcagcgagaccagcgc
ggacccagaggcgaccgcgacgatggtccgccgcgaatgacccggccacgtgaatcgacc
ggtcgaggccaatacgacgggcctccttcgcgggttgacgattcgggagtctggatcaaa
ttcaatgtcggcgataacgccggggtctcaccgggcgactttgtcggctgcatcgccaac
gaggcgggtgtcccacgtaccgtcatcggaaacattcagatcctccagaccgtcagcttc
gttcaggtcgctgctgaggcggcagagcagattctcggtgccgttcagggagtccgcctg
cgaggaagacgagtccaggccatgcccggcacgccccctcgtcgagacttccgccccggc
cgggacgaaggaccaaaccgccgcggcaatcgcaactag
DBGET
integrated database retrieval system
