Schlesneria sp. DSM 10557: QJS52_23160
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Entry
QJS52_23160 CDS
T10918
Name
(GenBank) cadherin domain-containing protein
Organism
schl Schlesneria sp. DSM 10557
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CLSTN_C
Cadherin_4
Lipoprotein_1
Motif
Other DBs
NCBI-ProteinID:
XFP03555
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All DBs
Position
3300285..3306566
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AA seq
2093 aa
AA seq
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MILQSWLNSVLARLNASSGHTRRRRSNGIQSTTPTVVEHLEQRRMLTDPVVAAATVFINE
TTQVFPYASTPANPAQIAVSVTDPDAAPDNYSPGNLAITAGNTDYNGNGQPAFRVDVIGG
VDVIVVNDAADLNYEAQPTYTLTVVATDNSGATGTNTITINLNNLNDRPVIPQYPYYNGW
IPTPTIPDGSVNVFDVRENSFNGTVVGTVTAIDQDIDSNPVQQATLTYVLVGTIPGFDAN
TPAFAIDPFTGRIRVTDQSFLDYEARRIANLGQGNLGEGGLSGFPDVVFDLQVRATDIRG
VSSQTNQFGNPTANGGNFVSDSHVYIRLRDVGEVPPNVANSTKTLAVNENSTVGLSVGFF
QLISGTDNFVIPQGTFTRIARPGLDPLEPQQRHSFEIVGGNPNNTFAIDPDTGEITVANP
LVNYETLNAYDLQIKVTDRNLHAVQIGAVDNVAPLSTVATLRITVNDVNEVTTIPNNQSF
NIPENTVNGTIVGSVIANDPDTQQPNGNANLVYSIISGNVVKVNGVEYAGVFSIDPATGV
ISVNNTTGLPNNIALNFENQSTFALTIKVVDRGDQGTSANNSVLINLQNVNETTPAVQDA
TFSIAENRPAGDLVGQVIASVGELGNTITSFQIMAGNKDGAFAIDSVGRITVANPSAIDF
EKNPVFNLTVRATDNGSPALFATGTITILLSNLNEQIVMLDQGPITVNENTPNGTIVGQI
VTSDPDNVNAPIQGQSFVINGGNTGGAFSIDPQGRIIVANSAALNFESTPTFTIVATVTD
TGIPSTSMAATITIALADINDAPIIGTQSFNLKEHSLPGTVVGTVQATDQDSPAQTLTFA
IIGGNDSGAFAIDPATGAIRVVDPGLIDYSSNPTFALTIQVTDNGAPARSSTATVNILLL
DGQEPQIANQSKTIPENSAVGTVIATVAASNGLAPYTYSIFSGNTNNAFTINPTTGVITV
SNPAALNYEAIKSFSLKVMVVDSQATKLADTATITINLTNVNEAPSLISLETAPIAYTEN
DVAPLTANIVAIDPDSNNASSAVIKITGNYQNGQDRLNFTNTAKITGVWDAATGTLTLTG
VDSFSNYRTAIRSVTYTNLSENPNTSTRTVSFSITDDGGLTSPIVSRNIALTSVNDAPVL
TGSSTISYSEADPATVINPVISVSDSDNATLTTATIRMPNYIAGQDILSFANNGVDMGNI
AVQSNANGVLTLVSAGGSATLAQWTNALRAVKYANSSGNPNQTPRSVQFQVTDGSALSNV
ITSTIEVTAVDFPPALSQVEPGSLLYTELSTVKVSSTITAFDFDSANLSGATIQITGNYQ
NGEDFLQFTNTAKITGVFNAATGMLTLTGVDTVANYQTALRSVSYFNSSSNPSGLLRTVA
FTVTDTTNVVSNSVVRTIALDAVNDAPVLSGIEETALDYLENTAPNYGTNNTTPISSTIQ
VNDPDSLITQATIRITGNYVPNQDFLRFTNTATIIGTWNAANGTLTLTGPDTAANYAAAL
QSVAFYNLHNAPNTSTRTVSYTVTDDGGAASGPKLTSNTVSREINVIAVNDPPVLTSSDT
TVLAYTEDATAVKILPNVLAADPDSDNLMGARIWISSNYNANGSKDMLVFVDTAKIKGSW
DPATGILTLSGVDSVSNYRTALRSIGFANSQSGLTAPNRTVSFSVIDDQGLSGNTVTRNI
SIATHPNGAVLSGIETVPAVYKANDPYTPPAPVTSTLVISDNDSTLLRSAVIKISGNYVR
GQDQLLISGAVANANQISAAWNSATGELTLSGLVPVANYINALRDVKYYNNGSSALSTLT
RTITFTVIDDTQLASNIATRNVTIQTTNTAPFLNVGGSSPLQYQEKDAATNVVPALTVQD
VDSPNIVSAAVKITGNYQQGQDQLVFSNTAKIKGSWDVLTGTLNLTGVDTRENYEAALRT
VKYLNTSNNPSTLTRTVGVTVNDGLATSNVASRNVTILALNDPPQIATNEAAALNYKPSQ
GAVSIAPSLSVTDPDSANITGATVRIAFNYQQGNDQLSFVNTAKISGTFDILTGILTLSG
SDTVANYRTALQSVKYQFNGVPLASTKTISFVANDGLALGNLATRDISVTPNA
NT seq
6282 nt
NT seq
+upstream
nt +downstream
nt
atgattctgcaatcctggttaaactcggtactcgcccggttgaatgcgtcttcaggtcat
acccgacgccgaaggtcgaatgggattcagtcgacaacacccacagtggtagaacatctg
gaacagcgtcggatgttgaccgatcccgtcgtagctgcggcgaccgtgttcatcaatgag
acgacgcaggtctttccatatgcctcaacacccgccaatccggcccaaattgcggtctcc
gtgacagacccggatgcagcgccagataactactccccgggcaatctggcgattaccgct
ggaaacacggactacaacggaaatgggcagcccgctttccgagtcgacgtcatcggcggc
gttgatgtcattgtcgtcaatgatgcggcagatctgaattatgaggcccagccgacttat
acattgaccgtggttgcgacggacaatagtggcgcgacgggcacgaataccatcacgatc
aatctcaataacttgaatgatcggcctgtgattccccagtatccgtactacaatggctgg
attcctacaccaacgatccctgacggaagtgtgaatgttttcgatgttcgggaaaacagc
tttaatggcaccgtcgtcgggacggtcacggccatcgatcaagacattgattccaacccg
gttcaacaggcgacgttgacgtatgtcctggtcggaacgattccgggattcgacgcgaac
actcccgcattcgccattgatcccttcaccgggcgcatccgggtcacggaccagtcattc
ctggattatgaggcacgtcgaattgccaatctggggcagggcaacttaggagaagggggc
ctttccggtttccccgatgtcgtctttgaccttcaggtgcgagcgacagacatccgaggt
gtgtcttcacaaaccaatcagttcggtaaccccactgccaatggcggtaacttcgtcagc
gacagccatgtttacatccggcttcgagatgtgggagaggttccaccgaatgtcgccaat
tcgacaaagacgctggccgtcaatgaaaacagcacagtcgggctgagcgttggattcttc
caactcatctccggaaccgacaattttgtcattccgcaagggaccttcacgcgaatcgcg
cgtcccggtctggatccactagagccacagcagcgtcacagttttgaaatcgtagggggc
aatcccaataacacgttcgccatcgatcctgatacgggtgagatcaccgttgccaatcct
ctcgttaactacgagacgctgaacgcctacgatctgcagatcaaagtcactgatcgtaat
ctgcacgcagtccaaatcggcgccgttgacaacgttgcaccgctttcgaccgttgcaact
ctgcggattaccgtgaatgacgtgaatgaagtcacgaccattccgaacaatcaatcgttt
aatattcctgagaatacggttaatgggacaatcgtcggtagcgttatcgccaacgatcct
gatacccagcagccgaacgggaatgccaatctcgtttacagcatcatcagcggtaacgtg
gttaaggtgaatggtgtcgagtacgccggagtcttctccattgatcctgccaccggggta
atttctgttaataataccacggggctgcccaacaacattgcgttgaattttgaaaatcag
tcgacgtttgcactgacgattaaagtggtggaccggggggatcagggaacgtcagcaaat
aactcggtcctgattaatctgcagaacgtgaatgagacgacaccggcggttcaggacgcg
acgttctcgattgcggaaaatcgccctgccggtgaccttgtgggacaagtcattgcctcc
gtaggtgaactcggaaacacgatcaccagtttccagatcatggcgggaaataaggacggc
gcgttcgcgatcgattccgtcggccgaatcactgtcgccaacccctctgcaatcgacttt
gaaaagaatccggtatttaacctgaccgtgcgggcgaccgataacggttcaccggccctg
tttgcgacggggacgatcaccattctgctgagcaacttgaacgagcagatcgtgatgctc
gatcaggggccaatcacagtcaacgagaatacgccgaacgggaccattgtgggccagatc
gtgacgtcggatcccgacaacgtgaatgcgccgatccagggacagtcgttcgtcattaat
gggggcaacacagggggggcgttctcaatcgatcctcagggacgcatcattgtggccaac
tcggctgctctgaactttgagtcgacaccgaccttcacgattgtcgccacagtgaccgat
acgggcatcccatccacgtccatggcagcgacaatcaccattgcactggcggacatcaac
gatgctccgatcatcggtacgcagtcctttaacctcaaggagcactcgttgccgggaacg
gtcgtagggacggttcaagcgacggaccaggattcgccagcccagaccctgacctttgcc
atcatcggcgggaatgattcgggagccttcgcgatcgatccggcgacgggagcgatcagg
gttgttgatccaggactgatcgactactcctcaaacccgacgtttgccttgacgattcag
gtcacggataacggagctcctgctcgatcctccacagccacggtcaacattctgctgctg
gacgggcaagaaccacagattgcaaatcagtcgaagacgattccggaaaactccgccgtc
ggtaccgtgatcgcgactgttgccgcatctaatggactcgctccttacacgtactccatc
ttcagcgggaatacgaataacgcgttcacgatcaatccgacgaccggggtgatcaccgtc
tcgaaccccgccgcactgaactacgaagcgatcaagtcgttctctctgaaggtgatggtc
gtcgacagtcaggccacgaaactggcggacaccgcgaccattacgatcaacctgacgaac
gtcaatgaggcaccgtcactgatctcgctggaaacggctccgattgcctataccgagaac
gacgtcgcgccattgactgcaaatattgtggccatcgatccggacagcaataacgcatca
tctgcggtgatcaagatcaccggaaactatcagaacggtcaggaccggttgaacttcacc
aatacggcgaaaatcacgggtgtctgggacgcagccacaggaactctaaccctgaccgga
gtcgattcattctcgaactaccgcacggcgattcggtcggtgacctacaccaacctgtca
gagaacccgaacacgtcaactaggacggtcagtttctccattacggatgatggtggcctg
accagtcccatcgtgagtcggaacattgccctgaccagcgtgaacgacgcacccgtgctt
accggatccagtacgatctcttattccgaagccgatcctgcgacagtgatcaatccagtg
atcagtgtcagcgacagtgacaatgcaacgctgacgactgcgacgatccggatgccaaac
tatattgctggccaggatatcctgagctttgccaataacggcgtcgatatgggcaacatc
gccgtgcagtcaaacgcgaatggggtgttgactctggtctctgccggaggttcagcaacg
ctggcacaatggaccaacgctttgcgtgctgtgaaatacgccaactccagcggaaatccc
aaccagacaccacggagtgtgcagttccaggtgactgatgggtccgctctgagcaatgtg
attaccagcaccatcgaagtcacggccgtcgatttccctcctgctctctcgcaggtcgag
ccagggtcactgctctacaccgagctttcgacagtaaaggtttcgtcgacgattacagcc
ttcgatttcgatagtgccaatctgtcgggtgcaacgatccagatcaccggcaactatcag
aacggtgaagacttcctgcagttcaccaacactgccaagatcaccggggtgttcaatgcc
gcgacagggatgctgaccctgaccggggtcgacacggtcgcaaattaccagaccgcgctt
cgttcggtttcctactttaattccagttccaacccctccgggttgctgcgaacggttgca
ttcacggtgaccgacaccacgaacgtggtgagtaactcggtggttcgtacgattgcactg
gatgcggtcaacgacgctcctgttctctcgggtattgaagagacggcgctggactacctg
gaaaatacggctccgaactacggcactaataacacgacgccgatttcgtccacgattcag
gtcaacgaccctgacagcctgattacgcaggccacgattcgcatcaccggaaattatgtg
ccgaaccaggacttcctgcggttcaccaatacggcaacgattatcggaacctggaatgcc
gcaaacgggaccctgacactgaccggtcccgataccgccgccaattacgctgctgcattg
cagtccgtagctttctacaacctgcataatgctccaaatacctccactcggaccgtcagc
tacacagtgacggatgacggcggtgcggcaagtggaccaaagctgacgagcaatacggtc
agccgtgagattaatgtgattgccgtgaatgatccccccgtgctgaccagctcggacaca
accgtcctggcctacacagaggatgcaacggccgtcaagatcctgccgaatgtgctggca
gccgatcctgacagtgataacctgatgggggctcggatctggatttcttctaactacaac
gctaacggcagcaaggacatgctggtcttcgtcgacacggcgaagatcaagggatcatgg
gatcctgcaaccggtatactcaccctgtccggagtcgatagcgtcagtaattaccggact
gctcttcgatccatcggtttcgccaactcgcaaagtggtttgacggctccaaaccggact
gtcagcttcagtgtgattgatgatcagggactgagcggcaatacggtgacgcgtaacatc
agcattgcaacgcatccgaatggtgcggtcttgtcgggaatcgagaccgtgcccgctgtc
tataaggcgaatgatccgtacaccccgcctgctcctgtgacatcaacgctggtgatctcg
gataacgacagtacgctgctgcgaagtgccgtgatcaagatttctggcaactatgtccga
ggacaggatcagttgctgatctccggagcagtggcgaatgcaaaccagatctccgcggcc
tggaactctgcaacgggtgaactgacgctgtctggactggttcctgtggccaactacatc
aacgcgttgcgggatgtgaagtactacaacaacggcagctcggcgctgagtaccctgacc
cggacgattacattcactgtgatcgacgacacgcaactggccagcaacattgcaacgcgc
aatgtgacaatccagacgaccaatacggctccgttcctgaacgtcgggggcagcagccca
ttgcagtaccaggagaaagacgcggcgacgaatgtcgttccggcgttgacggttcaggac
gtggacagtccgaatatcgtgagcgcggcggtcaagatcacaggaaactatcaacaggga
caggaccagctcgtgttctccaacacggccaagatcaagggaagctgggacgtcctgaca
ggaaccctgaatctgaccggggtcgatactcgggaaaactacgaggcagctttgcggaca
gtgaagtacctcaatacgagtaataaccccagcacattaacgagaactgtcggtgtcact
gtcaatgacgggctggccaccagcaacgtcgccagtcgcaatgtcaccatattggcactg
aacgatcctcctcagattgccacgaacgaggctgccgcactcaactacaaaccgtcgcag
ggtgccgtcagtatcgctccgtcgctctcggttaccgatccggatagtgcgaacatcacg
ggggccactgtgaggatcgcgttcaattatcagcaggggaacgaccagctttcgttcgtc
aacacagcgaagatttccggaacgttcgacatcctgacggggattctgacgctgtccggg
tccgacaccgtggcgaactaccgcacggcactgcagtcggtgaagtaccagttcaatgga
gtaccgctcgcatcgaccaagacgatctcattcgtggccaatgacggcctcgctctgggg
aatctggcgacgcgggacatctcggtcacaccgaacgcctaa
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