KEGG   Sinorhizobium chiapasense: RB548_00110
Entry
RB548_00110       CDS       T11111                                 
Name
(GenBank) integration host factor subunit beta
  KO
K05788  integration host factor subunit beta
Organism
schp  Sinorhizobium chiapasense
Brite
KEGG Orthology (KO) [BR:schp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:schp03032]
    RB548_00110
   03036 Chromosome and associated proteins [BR:schp03036]
    RB548_00110
   03400 DNA repair and recombination proteins [BR:schp03400]
    RB548_00110
DNA replication proteins [BR:schp03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    RB548_00110
Chromosome and associated proteins [BR:schp03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    RB548_00110
DNA repair and recombination proteins [BR:schp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      RB548_00110
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_euk_1 HU-CCDC81_euk_2 HU-CCDC81_bac_2 Regnase_1_C
Other DBs
NCBI-ProteinID: WVT03856
LinkDB
Position
19844..20146
AA seq 100 aa
MIKSELVQIVAARNPHLYHRDVENIVNAVLDEITDALAAGNRVELRGFGAFSVKNRPSRS
GRNPRTGDSVFVEEKWVPFFKTGKELRERLNPGMNGNDDD
NT seq 303 nt   +upstreamnt  +downstreamnt
gtgatcaagtcagaactggtgcagattgtggccgcacgcaatccgcatctataccaccgc
gacgtcgaaaatatcgtcaatgcggttcttgatgagatcacggatgcactggcggcggga
aaccgtgtcgagttacgcggcttcggcgccttctcggtcaagaacagaccgtcgcgctcg
ggtcgcaatccgcgcacgggcgactccgtcttcgtcgaagagaaatgggtgcccttcttc
aagacgggcaaggaactgcgcgagcggctcaatcccggtatgaacggcaacgacgacgac
tag

DBGET integrated database retrieval system