Sinorhizobium chiapasense: RB548_00620
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Entry
RB548_00620 CDS
T11111
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
schp Sinorhizobium chiapasense
Pathway
schp00061
Fatty acid biosynthesis
schp00071
Fatty acid degradation
schp01100
Metabolic pathways
schp01212
Fatty acid metabolism
schp02024
Quorum sensing
schp04146
Peroxisome
Module
schp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RB548_00620
00071 Fatty acid degradation
RB548_00620
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RB548_00620
09145 Cellular community - prokaryotes
02024 Quorum sensing
RB548_00620
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
schp01004
]
RB548_00620
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
schp04147
]
RB548_00620
Enzymes [BR:
schp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RB548_00620
Lipid biosynthesis proteins [BR:
schp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RB548_00620
Exosome [BR:
schp04147
]
Exosomal proteins
Exosomal proteins of breast milk
RB548_00620
Exosomal proteins of breast cancer cells
RB548_00620
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WVT03952
UniProt:
A0ABZ2B8X4
LinkDB
All DBs
Position
complement(130738..132438)
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AA seq
566 aa
AA seq
DB search
MAETSSQQAGSNTGKIWLKSYPPGVPAEIGPLPYRSIGEFFDHAVAQYSWRPAFTCMGKS
LTFAALNTHSAAIGAWLQSLGLSKGDRVAVMMPNILQNPVIVYGILRAGLTVVNVNPLYT
PRELEHQLVDAGAKAIFVLENFAHTVEQVVARTAVKHVVVASMGDMLGAKGAVVNLVVRR
VKKLVPAWSIPGHLSFRAALGRGAKLTLTTPHVAPSDVAFLQYTGGTTGVSKGATLTHSN
LLSNMAQMGLWLDTAFRRKPRPENLTFMCALPLYHIFALTVNSLMGLSTGGNNILIPNPR
DIPAFVKELGKYRTNIFPGLNTLFNALMNNAEFKKLDFSSLVLTFGGGMAVQRPVAERWL
AMTGCPIHEGYGLSETSPVATANRLDTGEFTGTIGMPLPSTEVEIRDDGGNTLPVGEIGE
ICIRGPQVMAGYWQRPDETAKAISPDGFFRTGDIGFMSTEGLTKIVDRKKDMILVSGFNV
FPNEIEEVAATHPGILECAAIGIADPHSGEAVKLFVVRKDPDLTEEDVKRHCAANLTNYK
RPRHVEFRTELPKSNVGKILRKDLRG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcggaaacaagctcgcagcaggcgggttccaacacgggaaaaatctggctgaaatcc
tatccgcccggcgtgccggccgaaatcggccccctgccctatcgctccatcggtgagttt
ttcgaccacgcggtcgcgcaatattcctggcgcccggcgttcacttgcatgggcaagtcg
ctgactttcgccgctctcaacacccattccgccgctatcggggcgtggctgcaatcgctc
ggcctcagcaagggcgatcgcgttgcagtgatgatgccgaacatcctgcagaacccggtg
atcgtctacggcatcctgcgtgcggggctaacggtggtcaacgtcaatccgctctatacg
ccgcgcgagctcgagcaccagctcgtcgatgcgggcgccaaggcaatcttcgtgctggag
aattttgcgcacacggtcgagcaggtcgtggcccgcacggcggtcaaacatgtggtggtc
gccagcatgggcgacatgctcggcgcgaagggcgcggtcgtcaatctcgtcgtgcggcgc
gtcaagaagctcgtgccggcctggtcgatcccgggacatctctccttcagggccgcgctt
ggccggggcgcgaaactgaccctcacgacgcctcatgtggcgccgtcggatgtcgctttc
ctgcaatataccggcggcacgacgggcgtttccaagggagccaccctcacgcattccaac
cttctgtccaacatggcgcagatggggctgtggttggataccgcctttcggcgcaagccg
cgcccggaaaacctgaccttcatgtgcgcgctgccgctctatcatatcttcgcgctgacg
gtgaattcgctgatgggcctctcgacgggcggcaacaacatcttgatccccaatccccgc
gatattcccgccttcgtcaaggagctcggcaagtaccggacgaacatcttcccaggcctc
aacaccctgttcaacgcgctgatgaacaacgccgagttcaagaagctcgacttttcgtcg
ctcgtgctgaccttcggcggcggcatggccgtgcagcggccggtggccgagcgttggctg
gcgatgaccggctgcccgatccatgaaggctacggactctccgagacttcaccggtcgcc
actgccaaccggctcgacacgggcgagttcaccggcacgatcggcatgccgctcccctcc
accgaagtcgagattcgcgacgatggaggcaacacgctgccggtcggcgagattggcgaa
atctgcatccgcggtccgcaggtcatggccggctattggcaaaggccggacgaaacggcc
aaggcgatctcgccggacggctttttccgcaccggcgatatcggcttcatgagcaccgag
ggtttgacgaaaatcgtcgaccgcaagaaagacatgatcctcgtttccggcttcaacgtc
ttcccgaacgagatcgaagaggtcgcggcaacacacccgggcatcctcgaatgtgccgcc
atcggaattgccgatccgcattcgggcgaggctgtgaaacttttcgtggtgcggaaggat
ccggacctcaccgaagaggacgtcaagcgccattgcgccgccaatctcaccaactacaag
cggccgagacacgtggaattccggaccgagttgccgaagtcgaatgtcggaaagatcctg
cgcaaggatttgcgcggctag
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