Sinorhizobium chiapasense: RB548_00835
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Entry
RB548_00835 CDS
T11111
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase NAD-binding domain-containing protein
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
schp Sinorhizobium chiapasense
Pathway
schp00071
Fatty acid degradation
schp00280
Valine, leucine and isoleucine degradation
schp00310
Lysine degradation
schp00362
Benzoate degradation
schp00380
Tryptophan metabolism
schp00410
beta-Alanine metabolism
schp00640
Propanoate metabolism
schp00650
Butanoate metabolism
schp00907
Pinene, camphor and geraniol degradation
schp00930
Caprolactam degradation
schp01100
Metabolic pathways
schp01110
Biosynthesis of secondary metabolites
schp01120
Microbial metabolism in diverse environments
schp01200
Carbon metabolism
schp01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
RB548_00835
00650 Butanoate metabolism
RB548_00835
09103 Lipid metabolism
00071 Fatty acid degradation
RB548_00835
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
RB548_00835
00310 Lysine degradation
RB548_00835
00380 Tryptophan metabolism
RB548_00835
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
RB548_00835
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
RB548_00835
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
RB548_00835
00930 Caprolactam degradation
RB548_00835
Enzymes [BR:
schp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
RB548_00835
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
RB548_00835
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
RB548_00835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
DAO
NAD_binding_2
FAD_binding_3
UDPG_MGDP_dh_N
F420_oxidored
NAD_binding_8
2-Hacid_dh_C
Pyr_redox
ApbA
NAD_Gly3P_dh_N
Pyr_redox_2
Sacchrp_dh_NADP
NAD_binding_7
AlaDh_PNT_C
Shikimate_DH
GIDA
Thi4
DUF7423
Motif
Other DBs
NCBI-ProteinID:
WVT03993
LinkDB
All DBs
Position
complement(174849..177062)
Genome browser
AA seq
737 aa
AA seq
DB search
MSYTNFKIETDADGIALVTWDMPEKSMNVFTQEVMEELNAIVDQTTADTAVKGVVFTSGK
SSFSGGADLSMIKSMFTFQAEEKKKDPANAAQKLFDLVGRMTGLFRKLETSGKPWVSAIN
GTCMGGAFELSLACHGRVASNSKAVKIALPEVKVGIFPGAGGTQRVPRLTNAQDALQMMT
TGSSLTAARAKAMGLVHEVVDPDKLIDAAKAMIKNGLKPVQPWDEKGFKVPGGGIWTPAS
AQLWPAASGILRRETYGNYPGAIAILKCVYEGLQVPFDTALKIEQRYFTEILQTTEAFSM
IRSLFVSMQELGKGARRPAGVPKSEFKKVGVVGAGFMGASIAYVTAAAGIPVTLIDRDME
TAEKGKAHSEGLVKESIGKGRLTKEEGEALLARITPSADFGDLKDASLVVEAVFEDRQVK
KDVIEKIEAVIAEDAIFASNTSTLPITGLAKNSKRPEQFIGIHFFSPVEKMMLTEVILGR
ETGDKALATALDYVAAIKKTPIVVNDTRGFYVNRCVFRYIHEAYDMLIEGVPPAMIENAA
KMAGMPVGPLSLNDEVAIDLSQKILKATVADLGDKAVDPRHMALINKMVDELDRRGRKNG
KGFYEYPAKPAKKYLWPELKTLYPQQSADKIDVEVLKRRFLATIALEAARTIEEGIVTDP
READVGSILGFGFAPYTGGTLSYIDGMGVKAFVKLCEKLAKNYGAHFKPTPLLKEMAEKG
ETFYGRFDPYGEAKKAA
NT seq
2214 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacacgaacttcaagatcgaaaccgacgccgacggcatcgcgctcgtcacctgg
gacatgcctgagaagtcgatgaacgtctttacccaggaggtgatggaggaactcaacgcg
atcgtcgaccagacgaccgccgacacggccgtcaaaggcgtcgtcttcacttctggcaag
tcgtccttctccggcggcgccgatctctcgatgatcaagtcgatgttcaccttccaggcg
gaggaaaagaagaaagacccggccaacgccgcgcaaaagctcttcgacctcgtcggtcgc
atgacaggcctcttccgcaagctcgaaacctcaggcaagccgtgggtctcggcgatcaac
ggcacctgcatgggcggtgccttcgagctgtcgcttgcctgccacggccgtgtcgcctcg
aattccaaggcggtgaagatcgccctgccggaagtcaaggtcggcatcttccctggcgcc
ggcggcacccagcgcgtgccgcgcctcaccaacgcgcaggacgcattgcagatgatgacg
accggttcgtcgctgacggcggcacgtgccaaggcgatggggcttgtgcacgaagtcgtc
gatccggacaagctgatcgacgccgccaaggcgatgatcaagaacggcctgaagccggta
cagccctgggacgaaaagggcttcaaagtgccgggcggcggcatctggacgccggcttcg
gcccaactctggcccgccgcctccggcattcttcggcgagaaacctatggcaactatcca
ggtgcaatcgccatcctgaaatgcgtctacgaaggcctgcaagtgccgttcgacacagct
ctcaagatcgagcagcgctatttcaccgagatcctgcagacgaccgaagccttctcgatg
atccgctcgctgttcgtctcgatgcaggaactcggcaagggcgcgcgccgccccgccggc
gtgccgaagtccgaattcaaaaaggtcggcgttgtcggcgccggcttcatgggtgcctcg
atcgcctacgtcaccgctgccgccggcatccccgttacgctgatcgaccgcgacatggaa
acggccgaaaagggcaaggcgcattcggaagggctggtgaaggaatcgattggtaagggc
cggctgaccaaagaagagggcgaagcgctgcttgcccgcatcacgccttcggccgacttt
ggcgacctcaaggatgcgagcctcgtcgtcgaggcggtcttcgaggaccggcaggtcaag
aaggatgtgatcgagaagatcgaagcggtgattgccgaggacgcaatcttcgcctccaac
acctcgacgctgccgatcaccggccttgccaagaattcgaagcggccggaacaattcatc
ggcatccacttcttctcgccggtcgagaagatgatgctgaccgaagtgatcctcggtagg
gagacaggcgacaaggcgctcgcgaccgcactcgattatgtcgccgcgatcaagaagacg
ccgatcgtcgtcaacgacacccgcgggttctacgtcaaccgctgcgtcttccgctatatc
cacgaagcctacgacatgctgatcgaaggcgtgccgccggcaatgatcgagaacgccgcc
aagatggccggcatgccggtcggtccgctgtcgctcaacgacgaagtggcgatcgacctc
agccagaagatcctgaaggccaccgtcgccgatctcggtgacaaggccgtcgatccgcgg
catatggcgctgatcaacaagatggtcgacgaactcgatcgccgcggccgcaagaacggc
aagggcttctacgaatatccagcgaaacccgccaagaaatatctctggccggagctgaaa
acgctctatccgcagcagagtgccgacaagatcgacgtcgaggttctgaaacggcgcttc
ctcgcaaccatcgcgctggaagccgcccgcaccatcgaggaaggcatcgtcaccgacccg
cgcgaggccgatgtcggctccatcctcggcttcggcttcgcgccctataccggtggcacg
ctgtcctacatcgacggcatgggtgtgaaagccttcgtcaagctctgcgagaagctcgcc
aagaactatggagcccacttcaagccgacgccgctgctaaaggagatggcggaaaagggc
gagactttctacggacgcttcgatccctatggagaggcgaagaaggcggcgtaa
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integrated database retrieval system