Sinorhizobium chiapasense: RB548_01020
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Entry
RB548_01020 CDS
T11111
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
schp Sinorhizobium chiapasense
Pathway
schp02024
Quorum sensing
schp03060
Protein export
schp03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RB548_01020 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RB548_01020 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RB548_01020 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
schp02044
]
RB548_01020 (secD)
Secretion system [BR:
schp02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RB548_01020 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Motif
Other DBs
NCBI-ProteinID:
WVT04026
UniProt:
A0ABZ2B9L9
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Position
221457..223991
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AA seq
844 aa
AA seq
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MRTSRWAVLAYVAIIIFGCLAAVPSVLPQAMREQFTSVLPFKPVTLGLDLRGGSHLVLEV
DGAGLQKARLNTLLDDTRRVLRGERVSASSARISGNAVTVSIADAADREKVLPKLQELAT
PVGAIGFGGAAPEVEVTTNGDVVTLAITEAGLADRMTKAVEQSLEIIRNRVDQVGVAEPL
IQRVGSNRILVQLPGLQDPTRLRELLGSTAQMSFHMLDQTVDVTQPAPRGVDILPGANDG
NRYPVESRVAISGERLDDAKVGFDQRTNQPVVDFTFDSLGARQFAEITRENVGRPFAIVL
DGKVLTAPVINEPILGGRGQISGNFTAQEATVLSALLRSGALPAPLTIIEERSVGPNLGS
DSIRMGLYTGLAGFGLVVALMVVLYGAWGMIANVGLVLHTALTIGVLGMIGSTLTLPGIA
GIILGIGMAVDANILINARIREETEGGAGAMKALDVGFNKAYATILDSNVTTLSGTVLLF
WLGSGPVRGFAVTMMLGIIISMFTSVTVVRLLMREVVVRRKMKKLEIPSLFGGVPHLPTI
SFMKRRFQAIGFSAFLSISSVVLFFTPGLNYGIDFVGGIQVEAAAKEKIDLPTLRHGLEA
LNLGEVALQDFGGGQSVLIRVQRQPGGEQEQTAALNRIKDAVTASVPGATLERTEVVGPT
ISGELQRSGFLAVGLAMVAILLYIWFRFEWHFAVGAIAVLLLDITKTVGFFALTGVDFNL
TAIAALLTMIGYSVNDKVVVYDRMRENLRKYKSMPFSDLIDMSINQVIARCIFTSMATAL
SLVPMAVWGGETVRSFAWPMIFGVIVATTSSIYIGGPILLFLSRWWKDREAARTAAQQPG
TPSA
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacatccagatgggcggttctcgcctatgtcgcgatcataatcttcggatgcctc
gcggcggtgccgagcgttctgccgcaagccatgagagagcaattcacgtcggtcctgccc
ttcaagccggtcactctcggcctcgatttgaggggcggctcgcacctcgttctcgaggtc
gacggcgccggcctgcagaaggcgcggctcaatacgcttcttgacgatacccgccgggtt
ctccgcggcgaacgcgtttccgcctcgtcggcgcgcatcagcggcaacgccgtaacggtc
agcatcgcggatgcggccgatcgcgaaaaggtgctgccgaagctgcaggagctggcgacg
cccgtcggcgcgatcggcttcggcggcgccgctcccgaggtcgaggtgacgacgaacggc
gacgtggtaacgctcgcgatcaccgaggcagggcttgccgaccgcatgaccaaggcggtc
gagcagagcctggaaatcatccgcaaccgcgtcgaccaggtcggcgtggccgagccactg
atccagcgcgtcggctcgaaccgcatcctcgtccagttacctggtctgcaggatccgacc
cgtctgcgcgagctcctgggctccacggcgcagatgagcttccacatgctcgatcagacc
gtggacgtcacgcagccggcaccgcgcggcgtcgacatccttcctggcgccaatgacggc
aaccgctatccggtcgaaagccgcgtcgccatttccggcgagcgtctcgacgatgccaag
gtcggcttcgaccagcgtacgaaccagccggtcgtggacttcaccttcgattcgcttggc
gcccgccagttcgctgagatcacgcgcgaaaatgtcggccgtcccttcgcaatcgtcctc
gacggcaaggtgctgaccgcaccggtcatcaacgagccgatcctcggcggccgtggccag
atcagcggtaatttcaccgctcaggaggcaacggttctttccgcgctccttcgctcgggt
gcgttgccggcgccgctcacgatcatcgaagagcgttcggtcggcccgaacctcggcagc
gattcgatccgcatgggtctctacaccggtctcgccggcttcggcctcgtcgtcgccctc
atggtcgtcctctatggcgcctggggcatgatcgccaatgtcggcctggtcctgcacaca
gccctgacgatcggcgttctcggcatgatcggctcgacgctcaccctgcccggcattgcc
ggtatcattctcggcatcggcatggccgtcgacgccaacatccttatcaacgcgcgcatc
cgcgaagagaccgaagggggcgccggcgcgatgaaggcgctggatgtcggctttaacaag
gcctacgcgacgatcctcgactccaacgtcaccacgctctccggcacggtgctcctgttc
tggctgggcagtggtccggttcgcgggttcgccgtcaccatgatgctcggcatcatcatc
tcgatgttcacgtcggtcaccgtcgtgcgcctcttgatgcgcgaggtcgtcgtccgccgc
aagatgaagaagctggagattccgtcgctcttcggcggcgtcccgcacctgccgaccatc
tccttcatgaagcgccgcttccaggcgatcggcttctccgccttcctgtcgatcagctcg
gtcgtcctgttcttcacgccgggccttaactacggcatcgacttcgtcggtggtatccag
gtcgaagcagcggccaaggagaagatcgacctgccgacgctgcgccacgggctcgaggcg
ctcaatctcggcgaggtcgccctgcaggacttcggcgggggccagtccgtgctcatccgc
gtccagcggcagccgggtggcgagcaggagcagacggcggcgctgaaccggatcaaggat
gcggtgacggcgtccgttccgggcgcgaccctggagcggaccgaggtcgtcgggccgacg
atcagcggcgagttgcaacgctcgggcttccttgccgtcggtctcgcgatggtggcgatc
ctgctctacatctggttccgcttcgaatggcacttcgccgtcggcgcgatcgcggtgctg
ttgctcgacatcaccaagacggtgggcttcttcgcgcttaccggcgtggacttcaacctg
acggcaatcgccgcactgctgacgatgatcggctattcggtgaacgataaggtggtcgtc
tacgaccgcatgcgtgaaaacctgcgcaagtacaagtcgatgcccttctccgatctcatc
gacatgagcatcaaccaggtgattgcgcgatgcattttcacctcgatggcgacggccctt
tcgctggtgccgatggcggtctggggcggcgaaacggtgcgcagcttcgcttggccgatg
atcttcggtgtcatcgtcgccacaacctcgtcgatctatatcggtgggccgatcctgctg
ttcctgagccgctggtggaaggatcgcgaggccgctcgcaccgcggcgcagcagccggga
acgccatccgcgtga
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