Sinorhizobium chiapasense: RB548_05430
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Entry
RB548_05430 CDS
T11111
Symbol
hupB
Name
(GenBank) DNA-binding protein HupB
KO
K03530
DNA-binding protein HU-beta
Organism
schp Sinorhizobium chiapasense
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
schp03032
]
RB548_05430 (hupB)
03036 Chromosome and associated proteins [BR:
schp03036
]
RB548_05430 (hupB)
03400 DNA repair and recombination proteins [BR:
schp03400
]
RB548_05430 (hupB)
DNA replication proteins [BR:
schp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
RB548_05430 (hupB)
Chromosome and associated proteins [BR:
schp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
RB548_05430 (hupB)
DNA repair and recombination proteins [BR:
schp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
RB548_05430 (hupB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_2
Rpf1_C
Motif
Other DBs
NCBI-ProteinID:
WVT04852
UniProt:
A0ABZ2BBE5
LinkDB
All DBs
Position
1135366..1135638
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AA seq
90 aa
AA seq
DB search
MNKNELVSAVAEKAGLSKTDASSAVDAVFETIQAELKNGGDIRLVGFGNFSVTRREASKG
RNPSTGAEVDIPARNVPKFTAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaatgagctcgtgtctgccgttgctgagaaggccggactttccaagaccgat
gcgtcttctgcagttgatgcagttttcgagaccatccaggctgaactgaagaacggtggc
gatatccgcctcgtcggtttcggcaacttctccgtgacccgccgcgaagcctcgaagggc
cgcaacccgtccacgggcgcggaagtcgacatcccggcccgcaacgtgccgaagttcacg
gccggcaaaggcctcaaggacgctgtcaactaa
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