Sinorhizobium chiapasense: RB548_06980
Help
Entry
RB548_06980 CDS
T11111
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
schp Sinorhizobium chiapasense
Pathway
schp03410
Base excision repair
schp03430
Mismatch repair
schp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
RB548_06980 (recJ)
03430 Mismatch repair
RB548_06980 (recJ)
03440 Homologous recombination
RB548_06980 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schp03400
]
RB548_06980 (recJ)
DNA repair and recombination proteins [BR:
schp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
RB548_06980 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
RB548_06980 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
RB548_06980 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WVT05138
LinkDB
All DBs
Position
1449496..1451298
Genome browser
AA seq
600 aa
AA seq
DB search
MDVLADPIQRAFLGVERSVSGQRWVSRLDQAGQNRALAISQVHGYSEMIARVLAGRGVAL
DDAAAFLDPTLRALMPDPDTLTDCRKAAERLALAIRRRERVVVFGDYDVDGAASCALMVR
FLRHFGVEADIYIPDRIFEGYGPNPQAIEQLLDNGANLIVTVDCGSTSHESLAVAAHRGT
DIVVIDHHQVGSSLPPCHALVNPNREDDLSGQGHLCAAGVVYLALVNTLRVLRGQGDPRA
VSFDLLAQLDLVALATVCDVVPLKGLNRAYVVKGLIAARHMGNPGLAALLRKAAIGGPVT
PYHLGFLIGPRINAGGRIGDAALGSRLLTLDDAVAAEAIAGRLDELNRERQAMEAAMLAE
AEAEVLAEYGTGEGASVIVTARESWHPGIVGLIAARIKEKFRRPAFAIAFDPSGRGTGSG
RSINGFDMGRLVRAAVESGLLVKGGGHAMAAGLTVERAHLGRLRQFFEERAESVVRDLVS
TETLKVDGALGASGATIELVDLLEQAGPYGSGHPQPVFAFPQHRLRDSRQVGSNHVKVTL
EGQDGSRIDGIAFRAAETPLGDFLLRGRGSTMHVAGSVSADLWQGTRRVQLRVTDAAKAI
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atggacgtattggcggatccgatccaacgggcatttctcggcgtcgagcgctcggtcagc
ggacagcgttgggtatcgcgtctggatcaagccgggcagaaccgggcgttggcgatcagc
caggtccacggctattccgagatgatcgcccgcgtgttggccggccgcggcgtagcgctc
gacgatgccgccgcctttcttgacccgacgcttcgcgcgctgatgcccgatccggacacc
ttgaccgactgccgcaaggcggccgagcggctggcgctggcgatacgccgccgcgagaga
gtggtggtattcggggactatgacgtcgacggcgccgcctcctgcgcgctgatggtccgc
ttcctgcgccatttcggagtcgaggctgacatctacattcctgaccgcatcttcgaaggt
tatggccctaatccgcaggcgatcgagcaactgctcgacaacggcgccaatcttatcgtc
accgtcgactgtggttcgaccagccacgagtccctcgcggttgccgcccaccgcggtacc
gatatcgtcgtcatcgaccaccatcaggtgggttcttcccttccaccttgtcacgcgctc
gtcaatccgaaccgcgaggacgacctctccggccaggggcatctgtgcgcagccggcgtt
gtctatcttgcgctcgtcaacaccctgcgggtactgcgcggccaaggtgacccgcgtgca
gtttccttcgatctgttggcgcagcttgatcttgtcgcattggcaactgtctgcgacgtg
gtgccgctcaaggggctcaatcgcgcctatgtggtcaagggcctgatcgccgcccgtcat
atgggcaatccggggctcgcagcgctcctccgcaaggctgcaatcggcggccctgtgacg
ccctatcaccttgggttcctgatcggcccgcgtatcaacgcgggcggacgaatcggtgac
gccgcgctcggtagccggctgttgacgctcgacgatgcggtggccgccgaagcgatcgcc
ggccggctcgatgaactcaaccgcgagcgccaggccatggaggcggcgatgctcgccgag
gccgaagcggaggtgctggcggaatacgggaccggcgagggggcatcggtgatcgtcacg
gcgcgggaaagctggcaccctggaatcgttggcctcattgcagcacgcatcaaggaaaaa
ttccgccggccggccttcgcaatcgcctttgatccgagtggacgaggcacgggatcgggg
cgttcgatcaatggttttgacatgggcaggctggtgcgggcggcggtcgaaagcggtctt
ctcgtcaagggcggcggccatgcgatggctgccggcttaacggtcgaacgcgcgcatctc
ggcaggcttcgtcagtttttcgaagagcgggccgaatcggtggtgcgcgatcttgtgtcc
acggaaaccctgaaggtagacggcgcgcttggcgcgtcgggcgctacgatcgagctggtc
gatctgctggagcaggccggcccttacggttccggacatccgcagccggtcttcgccttt
ccgcagcaccggctgcgcgactcccggcaggtcggctccaatcacgtcaaggtaacgctc
gagggccaggatggcagccggatcgacggtattgcctttcgcgccgcggaaacacctctc
ggcgacttcctgctccgcggccgcggctctaccatgcatgtcgcgggatcggtttccgca
gacctctggcagggaacccgacgcgtccagctgcgcgtgaccgacgcagcaaaggcgatc
tga
DBGET
integrated database retrieval system
