Sinorhizobium chiapasense: RB548_07270
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Entry
RB548_07270 CDS
T11111
Name
(GenBank) extracellular solute-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
schp Sinorhizobium chiapasense
Pathway
schp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RB548_07270
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
schp02000
]
RB548_07270
Transporters [BR:
schp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
RB548_07270
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
WVT05185
LinkDB
All DBs
Position
complement(1508160..1509974)
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AA seq
604 aa
AA seq
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MRAVLSGLAMLVAASTFGNEALAAPVHAISMHGEPALPADFKNFPYVNPNVKKGGKISYG
VVGTFDSLNPFILKSMRTTARGMWDPAFGNLVYESLMQRSQDEPFTMYGLLAETVEWDED
RTFIQFNLNPRARWADGQPVTAEDVIFTFELMRDRGRAPFSNRLSKVSKMEKVGDRSVRF
TFNEDVDREFPLLLALSPVLPKHAINVDAFDRTTLEPPLGSGPYRVADVKAGERIVYRRN
PDYWGKDLPSKIGFDNYDEISVEYFLQENSLFEAFKKGEVDVYPEGSATKWARGYDFPAV
RSGDVIKDSFTPRTPSGMLGFVFNTRRPMFNNIKLRQGLALVFDFEWVNKNLFDSAYTRT
QSYWQNSSLSFLGAAADDRELGLMGDVRERINPTILDGTYRLPVTDGSGRDRNVLREAVT
LLREAGYAIKDGKMVDAKGTPLAFEIMSQNAGQEKIALAYQRFLAPLGIVATVRTVDDSQ
YQQRSQSFDYDVIIKSFPSSLSPGVEQVGRWGSQSRDRQGSENFAGVADKDVDRLISNIL
QARTTEDFTAAVRSHDRLLVSNAYVVPLYHLDSQWIARWKHIGRPATVPLYGYQLPTWWD
ERAQ
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
ttgcgcgcagttctttccggccttgccatgcttgtggccgccagcacattcggcaatgag
gccctggcggcgcccgtgcatgccatttccatgcacggcgagcctgccctgcccgccgac
ttcaagaacttcccttacgtcaaccccaacgtgaagaagggcggaaagatttcctatggc
gtcgttggcacgttcgacagcctcaaccccttcatcctgaagagcatgcggacgaccgcc
cgagggatgtgggatccggccttcggcaacctcgtctatgaatcgctgatgcagcgctcc
caggacgagccgttcacaatgtacggactgcttgctgaaaccgtcgaatgggacgaagat
cgcaccttcatccaattcaacctgaatcccagggcgcgctgggccgacggccagcccgtg
accgccgaagacgtcattttcacgttcgagttgatgcgcgataggggacgcgctcccttc
agcaaccgcctctccaaggtctcgaagatggaaaaggtcggcgaccgcagtgtccgcttt
accttcaacgaggatgtcgatcgcgaattcccgctgctgctcgcgctttcacccgtattg
ccgaaacacgcgatcaatgtcgatgcgttcgacaggacaacgctcgagccgccgctcggc
tccggcccctatcgtgttgccgacgtgaaggcaggcgaacgcatcgtctatcgccggaat
cccgactactggggcaaggatctgccctccaagatcggcttcgacaattacgacgagatc
tccgtcgagtatttcctccaggagaactcgctcttcgaggccttcaagaagggcgaggtt
gatgtctatccggaaggtagcgcaaccaaatgggcacgcggttatgattttccggcagtg
cgctcgggggacgtgatcaaggacagtttcactccgagaaccccttccggaatgctcggc
ttcgtcttcaacacgcgcaggccgatgttcaacaacatcaagctacgccagggcctcgcg
ctcgtttttgatttcgaatgggtgaacaagaatcttttcgacagtgcctatacgcgaacc
cagagctactggcagaactcgtcgctttccttcctcggcgccgccgcagacgaccgtgag
cttgggctcatgggcgacgtcagagagaggatcaatccgaccattctcgatgggacctac
cgtctgcccgtcaccgatgggtccggtcgtgatcgcaatgtgctgcgggaggctgtgacg
ctgcttcgcgaagccggctacgccatcaaggacggcaagatggtcgacgccaaaggcacg
ccgcttgcattcgaaatcatgagccagaacgccgggcaggaaaagatcgccctcgcctat
cagcggttcctcgcaccgcttggaatcgtcgcgaccgtgcgcacggtcgacgattcccag
taccagcagcgcagccaatcgtttgactacgacgtgattataaaatcattcccgtcctcg
ctctctccgggcgtcgagcaagtcggccgttggggatcgcaatcgcgggacaggcagggg
agcgagaacttcgccggcgtcgccgacaaggacgtagacaggctgatcagcaacatcctg
caggcgcgcacgaccgaagacttcacagccgcggtccgctcccacgaccggctgctggta
tccaacgcctatgtggtgccgctctaccatctcgactcccaatggatcgcacgatggaaa
catatcgggcgtcctgccacggttccgctctacggctaccagctgccgacctggtgggac
gagcgcgcgcagtaa
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