Sinorhizobium chiapasense: RB548_08720
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Entry
RB548_08720 CDS
T11111
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
schp Sinorhizobium chiapasense
Pathway
schp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
schp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RB548_08720 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
schp03400
]
RB548_08720 (uvrB)
DNA repair and recombination proteins [BR:
schp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RB548_08720 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RB548_08720 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_22
AAA_16
Kinesin
UB2H
Microtub_bd
DUF2963
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
WVT05455
UniProt:
A0ABZ2BH09
LinkDB
All DBs
Position
1822141..1825161
Genome browser
AA seq
1006 aa
AA seq
DB search
MAQNPKNSPKKSSTPSGFEEAPQAPLSGTPLSGNVSDWVKQLEAEAEASTFESQREIASK
AGKHRKKVEIAASKKAAADSPRGGKGKPEIVGGKTARGTSMGGSHDPKTRAAAGLNPVAG
LDVALEDADKLTAGSGVTATVEALAKLIESGNPLFKDGKLWTPHRPARPEKSEGGISLNM
VTDYQPSGDQPTAIADLVDGLSSGERNQVLLGVTGSGKTFTMAKVIEATQRPAVILAPNK
TLAAQLYSEFKNFFPDNAVEYFVSYYDYYQPEAYVPRSDTYIEKESSINEQIDRMRHSAT
RSLLERDDVVIVASVSCIYGIGSVETYTAMTFQMNVGDRLDQRQLLADLVAQQYKRRDMD
FQRGSFRVRGDTIEIFPAHLEDAAWRISMFGDEIDSITEFDPLTGQKTGDLKSVKIYANS
HYVTPRPTLNAAIKSIKQELAFRLEELEKAGRLLEAQRLEQRTRYDLEMLEATGSCQGIE
NYSRYLTGRKPGEPPPTLFEYIPDNALIFIDESHVTIPQIGGMYRGDFRRKATLAEYGFR
LPSCMDNRPLRFEEWDAMRPDTIAVSATPGGWEMEQSGGVFAEQVIRPTGLIDPPVEVRS
AKTQVDDVLGEIRETAAAGYRTLVTVLTKRMAEDLTEYLHEQGVRVRYMHSDIDTLERIE
IIRDLRLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVD
GKVILYADTITGSMQRAMEETARRREKQMAYNLENGITPESVKAKISDILDSVYERDHVR
ADISGVSGKGFADGGHLVGNNLQAHLNALEKQMRDAAADLDFETAARLRDEIKRLKAAEL
AALDDPLAREEARSQESGKRASKGTAYATDSLPPVGRVGEGKNQEAPPGPTGHPSHKGEG
KTGGYFAKPSLDEMGPGTDTERPLFRKPDLDEMGHDVAVPAGKGQSLFRKNTLDEMTVGR
TEKPVAGKVPEKPLIRAKPGVGSYEDPAEEKRRKGRTKGKTGRPGR
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaaatccgaagaactctccgaagaaatcgtcaacacccagcggtttcgaagaa
gcaccgcaggcgccgctttccggcacgccgctgtccggcaatgtttccgactgggtaaag
cagctcgaggcggaagccgaagccagtaccttcgaaagccagcgcgagatcgcctctaag
gcgggcaagcatcgcaagaaggtcgagatcgctgcgtccaagaaagcagcagcggacagc
ccgcgcggcggcaagggcaagccggagatcgtcggcggcaaaaccgcccgcggcacgtcg
atgggcggtagtcacgacccgaagacgcgcgccgccgcggggctcaatccggtggccggc
cttgatgtcgcgctggaggatgccgacaagctgaccgccggttcgggcgtcacggccacc
gtcgaagcgctcgccaagctgatcgagagcggcaacccgctgttcaaggacggcaagctc
tggacgccgcaccgccctgcccggcccgagaaatcggaaggtggcatttcgctgaacatg
gttacggactatcagccctccggcgaccagccgacggcgatcgcagaccttgtcgatggc
ctttcctccggcgagcgcaaccaggtgctgctcggcgtcaccggctcgggcaagaccttc
accatggcaaaggtgatcgaggctacgcagcgcccggccgtcatcctcgcgccgaacaag
acgctcgccgcccagctctattcagaattcaagaacttcttcccggacaacgcggtcgag
tatttcgtctcctactacgactactaccagccggaagcctatgtgccgcgctcggacacc
tatatcgagaaggaatcctcgatcaacgagcagatcgaccgcatgcgccattcggcgacg
cgctcgctcctggaacgcgacgacgtggtcatcgtcgcctctgtctcctgcatctacggt
atcggctcggtcgagacctatacggcgatgactttccagatgaatgtcggcgaccggctc
gaccagcgacaactgctggccgacctggtggcgcagcagtacaagcgccgcgacatggat
ttccagcgcggctcgttccgcgtgcgcggcgacaccatcgagattttccccgcccacctg
gaggatgccgcctggcgcatctccatgttcggcgacgagatcgactcgatcaccgagttc
gacccgctgaccggccagaagaccggcgacctgaaatcggtgaagatctacgccaactcg
cactacgtgacgccgcgcccgacgctgaacgccgccatcaagtcgatcaagcaggaactg
gcttttcggctcgaggaactggaaaaggcgggccgccttctcgaagcgcagcggctggag
cagcgcacccgctacgacctcgaaatgctggaggccaccggctcctgccagggcatcgag
aactattcgcgttatctcaccggccgcaagccgggcgagccgccgccgacgctgttcgaa
tatattcccgacaacgcgctgatcttcatcgacgagagccacgtcaccattccgcagatc
ggcggcatgtatcgcggcgacttccgtcgcaaggcgacgttggccgaatatggcttccgc
ctgccctcctgcatggacaaccgcccgctgcgcttcgaggaatgggacgcgatgcgcccg
gacacgatcgccgtctcggcaacgcccggcggctgggagatggaacagtccggcggcgtc
tttgccgaacaggtgatccgcccgaccggcctcatcgacccaccggtcgaggtgcgttcg
gcgaagacgcaggtcgacgatgtgctcggagaaatccgcgagaccgccgccgccggctac
cgcacgctcgtcaccgtgctcacaaaacgcatggcggaggatctcacagaatatctgcac
gagcagggcgtgcgggtgcgctacatgcactccgacatcgacacgctggagcgcatcgag
atcatccgcgacctgcgcctcggcgccttcgacgtgctggtcggcatcaacctgttgcgc
gagggcctcgacattcccgaatgcggcttcgtcgccatcctagacgccgacaaggaaggt
ttcctgcgctcggaaacctcgctgatccagacgatcggccgcgccgcccgcaacgtcgac
ggcaaggtcatcctttacgccgacaccatcaccggctccatgcagcgcgcgatggaggaa
accgcccgccgccgcgagaagcagatggcctacaacctcgaaaacggcatcacgccggaa
tcggtgaaggcgaagatctccgacattctcgacagcgtctacgagcgcgaccacgtgcgc
gccgacatttccggcgtctccggcaagggttttgccgacggcggacatctcgtcggcaac
aatctgcaggcgcatctcaacgcgctcgaaaaacagatgcgcgacgccgccgccgacctc
gacttcgaaaccgctgcacgtctccgcgacgagatcaagcgcctcaaggccgccgagctc
gccgcgctggatgatccgctggcacgcgaagaggcaaggtcgcaggaaagcggcaagcgg
gccagcaagggcacggcatacgcgaccgactccctcccccctgtggggagggttggggaa
gggaaaaaccaggaagcccctcccggccctacgggccacccttcccacaagggggaggga
aagaccggcggctacttcgccaagccctcgctcgacgagatggggccaggcaccgacacc
gaacgcccgctcttccgcaagcccgacctcgacgaaatgggccacgacgtcgccgtccct
gccggcaaggggcaatcgctcttccgcaagaacacgctcgacgagatgaccgtcggccgg
acggaaaagccggtagcgggaaaggtgccggagaagccgctgatccgggcaaaaccgggt
gttgggtcgtatgaggacccggcggaggagaagcgccgcaaagggcggacgaagggcaag
actgggcggccggggcggtga
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